Evidence map›Paper›PMID 29767721›Full record

ArticleHuman molecular genetics2018

BHD-associated kidney cancer exhibits unique molecular characteristics and a wide variety of variants in chromatin remodeling genes.

Hisashi Hasumi, Mitsuko Furuya, Kenji Tatsuno, Shogo Yamamoto, Masaya Baba, Yukiko Hasumi, Yasuhiro Isono, Kae Suzuki, Ryosuke Jikuya, Shinji Otake and 18 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Multiple Myeloma in a Patient with Birt-Hogg-Dubé Syndrome.Internal medicine (Tokyo, Japan) · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Surgical Insights for the Management of Variant Histology in Renal Cell Carcinoma.International braz j urol : official journal of the Brazilian Society of Urology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 4 institutions in 2 countries.

Hisashi HasumiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Mitsuko FuruyaDepartment of Molecular Pathology, Yokohama City University, Yokohama, Japan.
Kenji TatsunoGenome Science Division, Research Center for Advanced Science and Technology, The University Tokyo, Tokyo, Japan.
Shogo YamamotoGenome Science Division, Research Center for Advanced Science and Technology, The University Tokyo, Tokyo, Japan.
Masaya BabaUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Yukiko HasumiUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Yasuhiro IsonoDepartment of Otorhinolaryngology, Yokohama City University, Yokohama, Japan.
Kae SuzukiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Ryosuke JikuyaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Shinji OtakeDepartment of Urology, Yokohama City University, Yokohama, Japan.
Kentaro MuraokaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Kimito OsakaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Narihiko HayashiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Kazuhide MakiyamaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Yasuhide MiyoshiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Keiichi KondoDepartment of Urology, Yokohama City University, Yokohama, Japan.
Noboru NakaigawaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Takashi KawaharaDepartment of Urology, Yokohama City University, Yokohama, Japan.
Koji IzumiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Junichi TeranishiDepartment of Urology, Yokohama City University, Yokohama, Japan.
Yasushi YumuraDepartment of Urology, Yokohama City University, Yokohama, Japan.
Hiroji UemuraDepartment of Urology, Yokohama City University, Yokohama, Japan.
Yoji NagashimaDepartment of Surgical Pathology, Tokyo Women's Medical University, Tokyo, Japan.
Adam R MetwalliUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Laura S SchmidtUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Hiroyuki AburataniGenome Science Division, Research Center for Advanced Science and Technology, The University Tokyo, Tokyo, Japan.
W Marston LinehanUrologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Masahiro YaoDepartment of Urology, Yokohama City University, Yokohama, Japan.
Yokohama City University · JPNational Institutes of Health · USLeidos (United States) · USTokyo Women's Medical University · JP

Funding

Molecular Therapeutics of Kidney Cancer: VHL Gene and Fumarate Hydratase GeneZIABC011038 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$29.8M
Clinical Nursing and Data Management CoreZIDBC011089 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$17.4M
CCR NIH HHS HHSN261200800001CNCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

Birt-Hogg-Dubé (BHD) syndrome is a hereditary kidney cancer syndrome, which predisposes patients to develop kidney cancer, cutaneous fibrofolliculomas and pulmonary cysts. The responsible gene FLCN is a tumor suppressor for kidney cancer, which plays an important role in energy homeostasis through the regulation of mitochondrial oxidative metabolism. However, the process by which FLCN-deficiency leads to renal tumorigenesis is unclear. In order to clarify molecular pathogenesis of BHD-associated kidney cancer, we conducted whole-exome sequencing analysis using next-generation sequencing technology as well as metabolite analysis using liquid chromatography-mass spectrometry and gas chromatography-mass spectrometry. Whole-exome sequencing analysis of BHD-associated kidney cancer revealed that copy number variations of BHD-associated kidney cancer are considerably different from those already reported in sporadic cases. In somatic variant analysis, very few variants were commonly observed in BHD-associated kidney cancer; however, variants in chromatin remodeling genes were frequently observed in BHD-associated kidney cancer (17/29 tumors, 59%). Metabolite analysis of BHD-associated kidney cancer revealed metabolic reprogramming toward upregulated redox regulation which may neutralize reactive oxygen species potentially produced from mitochondria with increased respiratory capacity under FLCN-deficiency. BHD-associated kidney cancer displays unique molecular characteristics that are completely different from sporadic kidney cancer, providing mechanistic insight into tumorigenesis under FLCN-deficiency as well as a foundation for development of novel therapeutics for kidney cancer.

Indexed as

Birt-Hogg-Dube SyndromeChromatin Assembly and DisassemblyDNA Copy Number VariationsExome SequencingGerm-Line MutationHumansKidney NeoplasmsProto-Oncogene ProteinsTumor Suppressor ProteinsFLCN protein, humanProto-Oncogene ProteinsTumor Suppressor Proteins

Identifiers

PMID29767721
PMCPMC6048985
OpenAlexW2803574588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.