Evidence map›Paper›PMID 29766331›Full record

ArticleArchives of virology2018

Complete nucleotide sequences and annotations of φ673 and φ674, two newly characterised lytic phages of Corynebacterium glutamicum ATCC 13032.

Yurgis A V Yomantas, Elena G Abalakina, Juliya S Lobanova, Victor A Mamontov, Nataliya V Stoynova, Sergey V Mashko

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Genome Sequence ofmicroPublication biology · 2026
    Article
  2. Genome sequence of PSonyx, a singleton bacteriophage infectingMicrobiology resource announcements · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yurgis A V YomantasAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation.
Elena G AbalakinaAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation.
Juliya S LobanovaAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation. Ulchona@list.ru.
Victor A MamontovAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation.
Nataliya V StoynovaAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation.
Sergey V MashkoAjinomoto-Genetika Research Institute, 1st Dorozhny pr. 1-1, 117545, Moscow, Russian Federation.
Ajinomoto (Russia) · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genomes of two new lytic phages of Corynebacterium glutamicum ATCC 13032, φ673 and φ674, were sequenced and annotated (GenBank: MG324353, MG324354). Electron microscopy studies of both virions revealed that taxonomically they belong to the Siphoviridae family and have a polyhedral head with a width of 50 nm and a non-contractile tail with a length of 250 nm. The genomes of φ673 and φ674 consist of linear double-stranded DNA molecules with lengths of 44,530 bp (G+C = 51.1%) and 43,193 bp (G+C = 50.7%) and identical, protruding, cohesive 3' ends 13 nt in length. The level of identity between the φ673 and φ674 genomes is 85.2%. Two major structural proteins of each virion were separated via SDS-PAGE and identified using peptide mass fingerprinting. Based on bioinformatic analysis, 56 and 54 ORFs were predicted for φ673 and φ674, respectively. Only 20 of the putative gene products of φ673 and 20 of φ674 could be assigned to known functions. Both genomes were divided into functional modules. Nine putative promoters in the φ673 genome and eight in the φ674 genome were predicted. One bidirectional Rho-independent transcription terminator was identified and experimentally confirmed in each phage genome.

Indexed as

Amino Acid SequenceBacteriophagesBase CompositionCorynebacterium glutamicumGenome, ViralMolecular Sequence AnnotationOpen Reading FramesPhylogenySequence Analysis, DNASiphoviridae

Identifiers

PMID29766331
PMCPMC6132909
OpenAlexW2803433787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.