Evidence map›Paper›PMID 29766218›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2018

QTL mapping and epistatic interaction analysis of field resistance to sudden death syndrome (Fusarium virguliforme) in soybean.

Ruijuan Tan, Bradley Serven, Paul J Collins, Zhongnan Zhang, Zixiang Wen, John F Boyse, Cuihua Gu, Martin I Chilvers, Brian W Diers, Dechun Wang

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Breeding for disease resistance in soybean: a global perspective.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  4. Article
  5. Article
  6. Genetic mapping of powdery mildew resistance genes in soybean by high-throughput genome-wide sequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  7. Characterization of SoybeanPlant physiology · 2019
    Article
  8. Different loci associated with root and foliar resistance to sudden death syndrome (Fusarium virguliforme) in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ruijuan TanDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Bradley ServenDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Paul J CollinsDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Zhongnan ZhangDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Zixiang WenDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
John F BoyseDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Cuihua GuDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Martin I ChilversDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA.
Brian W DiersDepartment of Crop Sciences, University of Illinois, 1101 W. Peabody Drive, Urbana, IL, 61801, USA.
Dechun WangDepartment of Plant, Soil and Microbial Sciences, Michigan State University, 1066 Bogue St., East Lansing, MI, 48824-1325, USA. wangdech@msu.edu.
Michigan State University · USUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageTwo interactive quantitative trait loci (QTLs) controlled the field resistance to sudden death syndrome (SDS) in soybean. The interaction between them was confirmed. Sudden death syndrome (SDS), caused by Fusarium virguliforme, is a major disease of soybean [Glycine max (L.) Merr.] in the United States. Breeding for soybean resistance to SDS is the most cost-effective method to manage the disease. The objective of this study was to identify and characterize quantitative trait loci (QTLs) underlying field resistance to SDS in a recombinant inbred line population from the cross GD2422 × LD01-5907. This population was genotyped with 1786 polymorphic single nucleotide polymorphisms (SNPs) using SoySNP6 K iSelect BeadChip and evaluated for SDS resistance in a naturally infested field. Four SDS resistance QTLs were mapped on Chromosomes 4, 8, 12 and 18. The resistant parent, LD01-5907, contributed the resistance alleles for the QTLs on Chromosomes 8 and 18 (qSDS-8 and qSDS-18), while the other parent, GD2422, provided the resistance alleles for the QTLs on Chromosomes 4 and 12 (qSDS-4 and qSDS-12). The minor QTL on Chromosome 12 (qSDS-12) is novel. The QTL on Chromosomes 8 and 18 (qSDS-8 and qSDS-18) overlapped with two soybean cyst nematode resistance-related loci, Rhg4 and Rhg1, respectively. A significant interaction between qSDS-8 and qSDS-18 was detected by disease incidence. Individual effects together with the interaction effect explained around 70% of the phenotypic variance. The epistatic interaction of qSDS-8 and qSDS-18 was confirmed by the field performance across multiple years. Furthermore, the resistance alleles at qSDS-8 and qSDS-18 were demonstrated to be recessive. The SNP markers linked to these QTLs will be useful for marker-assisted breeding to enhance the SDS resistance.

Indexed as

Epistasis, GeneticQuantitative Trait LociAllelesChromosome MappingDisease ResistanceFusariumGenetic LinkageGenotypeGlycine maxPlant BreedingPlant DiseasesPolymorphism, Single Nucleotide

Identifiers

PMID29766218
OpenAlexW2804696541

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.