Evidence map›Paper›PMID 29762781›Full record

ArticleNucleic acids research2018

The TubR-centromere complex adopts a double-ring segrosome structure in Type III partition systems.

Bárbara Martín-García, Alejandro Martín-González, Carolina Carrasco, Ana M Hernández-Arriaga, Rubén Ruíz-Quero, Ramón Díaz-Orejas, Clara Aicart-Ramos, Fernando Moreno-Herrero, María A Oliva

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Bárbara Martín-GarcíaDepartment of Structural and Chemical Biology, CSIC-Centro de Investigaciones Biológicas, Madrid 28040, Spain.
Alejandro Martín-GonzálezDepartment of Macromolecular Structures, CSIC-Centro Nacional de Biotecnología, Madrid 28049, Spain.
Carolina CarrascoDepartment of Macromolecular Structures, CSIC-Centro Nacional de Biotecnología, Madrid 28049, Spain.
Ana M Hernández-ArriagaDepartment of Structural and Chemical Biology, CSIC-Centro de Investigaciones Biológicas, Madrid 28040, Spain.
Rubén Ruíz-QueroDepartment of Structural and Chemical Biology, CSIC-Centro de Investigaciones Biológicas, Madrid 28040, Spain.
Ramón Díaz-OrejasDepartment of Structural and Chemical Biology, CSIC-Centro de Investigaciones Biológicas, Madrid 28040, Spain.
Clara Aicart-RamosDepartment of Macromolecular Structures, CSIC-Centro Nacional de Biotecnología, Madrid 28049, Spain.
Fernando Moreno-HerreroDepartment of Macromolecular Structures, CSIC-Centro Nacional de Biotecnología, Madrid 28049, Spain.
María A OlivaDepartment of Structural and Chemical Biology, CSIC-Centro de Investigaciones Biológicas, Madrid 28040, Spain.
Centro de Investigaciones Biológicas Margarita Salas · ESCentro Nacional de Biotecnología · ES

Funding

European Research Council 681299
6 · The paper itself

Abstract

In prokaryotes, the centromere is a specialized segment of DNA that promotes the assembly of the segrosome upon binding of the Centromere Binding Protein (CBP). The segrosome structure exposes a specific surface for the interaction of the CBP with the motor protein that mediates DNA movement during cell division. Additionally, the CBP usually controls the transcriptional regulation of the segregation system as a cell cycle checkpoint. Correct segrosome functioning is therefore indispensable for accurate DNA segregation. Here, we combine biochemical reconstruction and structural and biophysical analysis to bring light to the architecture of the segrosome complex in Type III partition systems. We present the particular features of the centromere site, tubC, of the model system encoded in Clostridium botulinum prophage c-st. We find that the split centromere site contains two different iterons involved in the binding and spreading of the CBP, TubR. The resulting nucleoprotein complex consists of a novel double-ring structure that covers part of the predicted promoter. Single molecule data provides a mechanism for the formation of the segrosome structure based on DNA bending and unwinding upon TubR binding.

Indexed as

Binding SitesCentromereClostridium botulinumDNA, BacterialDNA-Binding ProteinsOperonPromoter Regions, GeneticProphagesDNA, BacterialDNA-Binding Proteins

Identifiers

PMID29762781
PMCPMC6009700
OpenAlexW2803817061

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.