Evidence map›Paper›PMID 29762030›Full record

ArticleJournal of the American Chemical Society2018

Structure-Function Analysis of the Extended Conformation of a Polyketide Synthase Module.

Xiuyuan Li, Natalia Sevillano, Florencia La Greca, Lindsay Deis, Yu-Chen Liu, Marc C Deller, Irimpan I Mathews, Tsutomu Matsui, David E Cane, Charles S Craik and 1 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Fragment antigen binding domains (FSynthetic and systems biotechnology · 2022
    Article
  11. Article
  12. HowACS chemical biology · 2021
    Article
  13. Article
  14. Article
  15. Recent trends in biocatalysis.Chemical Society reviews · 2021
    Review
  16. Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Synthetic biology enabling access to designer polyketides.Current opinion in chemical biology · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiuyuan Li
Natalia SevillanoDepartment of Pharmaceutical Chemistry , University of California San Francisco , San Francisco , California 94158 , United States.
Florencia La GrecaDepartment of Pharmaceutical Chemistry , University of California San Francisco , San Francisco , California 94158 , United States.
Lindsay Deis
Marc C DellerStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford University , Menlo Park , California 94025 , United States.
Irimpan I MathewsStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford University , Menlo Park , California 94025 , United States.ORCID 0000-0001-6254-3519
Tsutomu MatsuiStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford University , Menlo Park , California 94025 , United States.
David E CaneDepartment of Chemistry , Box H, Brown University , Providence , Rhode Island 02912-9108 , United States.ORCID 0000-0002-1492-9529
Charles S CraikDepartment of Pharmaceutical Chemistry , University of California San Francisco , San Francisco , California 94158 , United States.ORCID 0000-0001-7704-9185

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Renewable antibodies to secreted proteins and single and multi-pass cell surfaceP41CA196276 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WELLS, JAMES A · 2014 to 2018
$5.8M
BIOSYNTHESIS OF MICROBIAL PRODUCTSR01GM022172 · NIGMS · BROWN UNIVERSITY · PI CANE, DAVID E · 1985 to 2017
$5.7M
Structure, Mechanism, and Engineering of Assembly Line Polyketide SynthasesR01GM087934 · NIGMS · STANFORD UNIVERSITY · PI KHOSLA, CHAITAN · 2009 to 2021
$4.9M
Allosteric Inhibition of a Family of Proteolytic EnzymesR01GM104659 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2013 to 2016
$1.2M
NCI NIH HHS P41 CA196276NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM022172NIGMS NIH HHS R01 GM087934NIGMS NIH HHS R01 GM104659
6 · The paper itself

Abstract

Catalytic modules of assembly-line polyketide synthases (PKSs) have previously been observed in two very different conformations-an "extended" architecture and an "arch-shaped" architecture-although the catalytic relevance of neither has been directly established. By the use of a fully human naïve antigen-binding fragment (F

Indexed as

BiocatalysisCrystallography, X-RayHumansKineticsModels, MolecularPolyketide SynthasesProtein ConformationScattering, Small AngleX-Ray DiffractionPolyketide Synthases

Identifiers

PMID29762030
PMCPMC6484869

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.