Evidence map›Paper›PMID 29761207›Full record

ArticleArchives of toxicology2018

Omics-based responses induced by bosentan in human hepatoma HepaRG cell cultures.

Robim M Rodrigues, Laxmikanth Kollipara, Umesh Chaudhari, Agapios Sachinidis, René P Zahedi, Albert Sickmann, Annette Kopp-Schneider, Xiaoqi Jiang, Hector Keun, Jan Hengstler and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Archives of toxicology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

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  8. In Vitro Liver Toxicity Testing of Chemicals: A Pragmatic Approach.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 3 countries.

Robim M RodriguesDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium.
Laxmikanth KolliparaLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V., Dortmund, Germany.
Umesh ChaudhariInstitute of Neurophysiology and Center for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
Agapios SachinidisInstitute of Neurophysiology and Center for Molecular Medicine Cologne, University of Cologne, Cologne, Germany.
René P ZahediLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V., Dortmund, Germany.
Albert SickmannLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V., Dortmund, Germany.
Annette Kopp-SchneiderDivision of Biostatistics, German Cancer Research Center, Heidelberg, Germany.
Xiaoqi JiangDivision of Biostatistics, German Cancer Research Center, Heidelberg, Germany.
Hector KeunComputational and Systems Medicine, Department of Surgery and Cancer, Imperial College London, London, UK.
Jan HengstlerLeibniz Research Centre for Working Environment and Human Factors at the Technical University of Dortmund, Dortmund, Germany.
Marlies OortsDrug Delivery and Disposition, Department of Pharmaceutical and Pharmacological Sciences, Katholieke Universiteit Leuven, Leuven, Belgium.
Pieter AnnaertDrug Delivery and Disposition, Department of Pharmaceutical and Pharmacological Sciences, Katholieke Universiteit Leuven, Leuven, Belgium.
Eef HoebenBioNotus GCV, Niel, Belgium.
Eva GijbelsDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium.
Joery De KockDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium.
Tamara VanhaeckeDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium.
Vera RogiersDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium.
Mathieu VinkenDepartment of In Vitro Toxicology and Dermato-Cosmetology, Vrije Universiteit Brussel, Laarbeeklaan 103, 1090, Brussels, Belgium. mvinken@vub.ac.be.
Vrije Universiteit Brussel · BEGerman Cancer Research Center · DEKU Leuven · BELeibniz Institute for Analytical Sciences - ISAS · DEUniversity of Cologne · DEImperial College London · GBLeibniz Research Centre for Working Environment and Human Factors · DEUniversity of Aberdeen · GB

Funding

European Research Council 335476
6 · The paper itself

Abstract

Bosentan is well known to induce cholestatic liver toxicity in humans. The present study was set up to characterize the hepatotoxic effects of this drug at the transcriptomic, proteomic, and metabolomic levels. For this purpose, human hepatoma-derived HepaRG cells were exposed to a number of concentrations of bosentan during different periods of time. Bosentan was found to functionally and transcriptionally suppress the bile salt export pump as well as to alter bile acid levels. Pathway analysis of both transcriptomics and proteomics data identified cholestasis as a major toxicological event. Transcriptomics results further showed several gene changes related to the activation of the nuclear farnesoid X receptor. Induction of oxidative stress and inflammation were also observed. Metabolomics analysis indicated changes in the abundance of specific endogenous metabolites related to mitochondrial impairment. The outcome of this study may assist in the further optimization of adverse outcome pathway constructs that mechanistically describe the processes involved in cholestatic liver injury.

Indexed as

ATP Binding Cassette Transporter, Subfamily B, Member 11Bile Acids and SaltsBosentanCell Line, TumorCell SurvivalDose-Response Relationship, DrugGene Expression ProfilingHumansLiverMetabolomicsOxidative StressProteomicsReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearTranscriptomeATP Binding Cassette Transporter, Subfamily B, Member 11Bile Acids and SaltsBosentanReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearAdverse outcome pathway.BosentanBSEPCholestasisHepaRGMetabolomicsProteomicsTranscriptomics

Identifiers

PMID29761207
PMCPMC6173297
OpenAlexW2802406017

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.