Evidence map›Paper›PMID 29759982›Full record

ArticleMolecular systems biology2018

Expression variation and covariation impair analog and enable binary signaling control.

Kyle M Kovary, Brooks Taylor, Michael L Zhao, Mary N Teruel

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kyle M KovaryDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA, USA.
Brooks TaylorDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA, USA.
Michael L ZhaoDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA, USA.
Mary N TeruelDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA, USA mteruel@stanford.edu.ORCID 0000-0002-2854-3598
Stanford University · US

Funding

INSTITUTIONAL TRAINING GRANT IN GENOME SCIENCET32HG000044 · NHGRI · STANFORD UNIVERSITY · PI MICHAEL P. SNYDER · 1995 to 2026
$32.2M
Stanford Islet Research CoreP30DK116074 · NIDDK · STANFORD UNIVERSITY · PI Seung K Kim · 2017 to 2026
$19.5M
TRAINING & OUTREACH COREP50GM107615 · NIGMS · STANFORD UNIVERSITY · PI FERRELL, JAMES E. · 2013 to 2017
$10.9M
Controlling tissue size by noise and feedbackR01DK106241 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI TERUEL, MARY N · 2015 to 2018
$1.4M
Controlling the rate of adipocyte differentiation: Experiments and theoryR01DK101743 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI TERUEL, MARY N · 2015 to 2017
$1.1M
CV7000S10OD018073 · OD · STANFORD UNIVERSITY · PI MEYER, TOBIAS · 2014 to 2014
$599k
Understanding control of adipogenesis by the dynamics of cAMPF32DK114981 · NIDDK · STANFORD UNIVERSITY · PI TAYLOR, BROOKS EDWARD · 2017 to 2018
$85k
Connecting early signaling dynamics to fat cell differentiation using fluorescent biosensors and single cell imagingF31DK112570 · NIDDK · STANFORD UNIVERSITY · PI ZHAO, MICHAEL · 2017 to 2018
$72k
NHGRI NIH HHS T32 HG000044NIDDK NIH HHS F31 DK112570NIDDK NIH HHS F32 DK114981NIDDK NIH HHS P30 DK116074NIDDK NIH HHS R01 DK101743NIDDK NIH HHS R01 DK106241NIGMS NIH HHS P50 GM107615
6 · The paper itself

Abstract

Due to noise in the synthesis and degradation of proteins, the concentrations of individual vertebrate signaling proteins were estimated to vary with a coefficient of variation (CV) of approximately 25% between cells. Such high variation is beneficial for population-level regulation of cell functions but abolishes accurate single-cell signal transmission. Here, we measure cell-to-cell variability of relative protein abundance using quantitative proteomics of individual

Indexed as

Gene Expression RegulationGenetic VariationSignal TransductionAnimalsCell DifferentiationCells, CulturedComputer SimulationEvaluation Studies as TopicExtracellular Signal-Regulated MAP KinasesFemaleHumansImage Processing, Computer-AssistedModels, MolecularOvumProteomicsXenopus laevisExtracellular Signal-Regulated MAP Kinasescellular heterogeneityMAPK/MEK/ERK signalingselected reaction monitoring mass spectrometrysingle‐cell proteomicsSRM‐MS

Identifiers

PMID29759982
PMCPMC5951153
OpenAlexW2786776255

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.