Evidence map›Paper›PMID 29759381›Full record

ArticleVaccine2018

Genomic evidence that the live Chlamydia abortus vaccine strain 1B is not attenuated and has the potential to cause disease.

David Longbottom, Michelle Sait, Morag Livingstone, Karine Laroucau, Konrad Sachse, Simon R Harris, Nicholas R Thomson, Helena M B Seth-Smith

Open access · hybridAbstract read
In one paragraph

Article in Vaccine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Chlamydiosis in Animals.Animals : an open access journal from MDPI · 2024
    Review
  4. Evaluation of the Protective Efficacy of Different Doses of aAnimals : an open access journal from MDPI · 2024
    Article
  5. Article
  6. Article
  7. Seroprevalence and Risk Factors ofAnimals : an open access journal from MDPI · 2023
    Article
  8. Review
  9. Article
  10. Pathogens (Basel, Switzerland) · 2022
    Article
  11. Review
  12. Efficacy of TwoVaccines · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

David LongbottomMoredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian EH26 0PZ, United Kingdom. Electronic address: david.longbottom@moredun.ac.uk.
Michelle SaitMoredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian EH26 0PZ, United Kingdom.
Morag LivingstoneMoredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian EH26 0PZ, United Kingdom.
Karine LaroucauBacterial Zoonoses Unit, French Agency for Food, Environmental & Occupational Health Safety (Anses), Maisons-Alfort, France.
Konrad SachseFriedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Jena, Germany.
Simon R HarrisInfection Genomics, Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, United Kingdom.
Nicholas R ThomsonInfection Genomics, Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, United Kingdom.
Helena M B Seth-SmithInfection Genomics, Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, United Kingdom.
Moredun Research Institute · GBWellcome Sanger Institute · GBAgence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail · FRFriedrich-Loeffler-Institut · DE

Funding

Biotechnology and Biological Sciences Research Council BB/E018939/1Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

backgroundThe live, temperature-attenuated vaccine strain 1B of Chlamydia abortus, the aetiological agent of ovine enzootic abortion (OEA), has been implicated in cases of vaccine breakdown. The aim of this study was to understand the nature of this attenuation through sequencing of the vaccine parent strain (AB7) and the derived mutant strains 1B and 1H, as well as to clarify the role of the vaccine strain in causing disease through comparative whole genome analysis.

methodsWhole genome sequencing was performed on: vaccine parent strain AB7; N-methyl-N'-nitro-N-nitrosoguanidine (NTG)-induced temperature attenuated mutant strain 1B grown from the commercial live vaccines Cevac Chlamydia and Enzovax; strain 1H a reverted NTG mutant; and 5 strains isolated from cases of OEA originating from animals from the original vaccine safety trial (2 strains) or from vaccinated ewes or ewes exposed to vaccinated animals (3 strains).

resultsWe confirmed that AB7 is in a different lineage from the reference strain S26/3. The genome of vaccine strain 1B contains ten single nucleotide polymorphisms (SNPs) created by the NTG treatment, which are identical to those found in strain 1H. The strains from OEA cases also cluster phylogenetically very tightly with these vaccine strains.

conclusionsThe results show that C. abortus vaccine strain 1B has an identical genome sequence to the non-attenuated "reverted mutant" strain 1H. Thus, the protection of the 1B vaccine is unlikely to be due to the NTG induced SNPs and is more likely caused by the administration of high doses of C. abortus elementary bodies that stimulate protective immunity. Vaccine-identical strains were also isolated from cases of disease, as well as strains which had acquired 1-3 SNPs, including an animal that had not been vaccinated with either of the commercial live OEA vaccines, indicating that the 1B vaccine strain may be circulating and causing disease.

Indexed as

Genome, BacterialAbortion, VeterinaryAnimalsBacterial VaccinesChlamydiaChlamydia InfectionsFemaleMethylnitronitrosoguanidineMutagensPhylogenyPolymorphism, Single NucleotidePregnancySequence Analysis, DNASheepSheep DiseasesVaccines, AttenuatedBacterial VaccinesMethylnitronitrosoguanidineMutagensVaccines, AttenuatedChlamydia abortusGenome analysisOvine enzootic abortionSingle nucleotide polymorphismsVaccination

Identifiers

PMID29759381
PMCPMC6005232
OpenAlexW2804974061

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.