Evidence map›Paper›PMID 29754461›Full record

ArticleFEBS letters2018

Computational modeling highlights the role of the disordered Formin Homology 1 domain in profilin-actin transfer.

Brandon G Horan, Gül H Zerze, Young C Kim, Dimitrios Vavylonis, Jeetain Mittal

Open access · bronzeAbstract readLetter
In one paragraph

Article in FEBS letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Titin's Intrinsically Disordered PEVK Domain Modulates Actin Polymerization.International journal of molecular sciences · 2025
    Article
  2. Molecular mechanism of Arp2/3 complex activation by nucleation-promoting factors and an actin monomer.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  12. International journal of molecular sciences · 2021
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  17. Profilin choreographs actin and microtubules in cells and cancer.International review of cell and molecular biology · 2020
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Brandon G HoranDepartment of Physics, Lehigh University, Bethlehem, PA, USA.ORCID 0000-0002-1848-1426
Gül H ZerzeDepartment of Chemical and Biomolecular Engineering, Lehigh University, Bethlehem, PA, USA.
Young C KimCenter for Materials Physics and Technology, Naval Research Laboratory, Washington, DC, USA.
Dimitrios VavylonisDepartment of Physics, Lehigh University, Bethlehem, PA, USA.
Jeetain MittalDepartment of Chemical and Biomolecular Engineering, Lehigh University, Bethlehem, PA, USA.
Lehigh University · USUnited States Naval Research Laboratory · US

Funding

Turning off the molecular switch for pathological self-assembly of FUSR01GM118530 · NIGMS · BROWN UNIVERSITY · PI FAWZI, NICOLAS LUX · 2016 to 2020
$1.6M
Theoretical and experimental studies of distributed actin turnoverR01GM114201 · NIGMS · LEHIGH UNIVERSITY · PI VAVYLONIS, DIMITRIOS · 2016 to 2019
$1.1M
NIGMS NIH HHS R01 GM114201NIGMS NIH HHS R01 GM118530
6 · The paper itself

Abstract

Formins accelerate actin polymerization, assumed to occur through flexible Formin Homology 1 (FH1) domain-mediated transfer of profilin-actin to the barbed end. To study FH1 properties and address sequence effects, including varying length/distribution of profilin-binding proline-rich motifs, we performed all-atom simulations of a set of representative FH1 domains of formins: mouse mDia1 and mDia2, budding yeast Bni1 and Bnr1, and fission yeast Cdc12, For3, and Fus1. We find FH1 has flexible regions between high-propensity polyproline helix regions. A coarse-grained model retaining sequence specificity, assuming rigid polyproline segments, describes their size. Multiple bound profilins or profilin-actin complexes expand mDia1-FH1, which may be important in cells. Simulations of the barbed end bound to Bni1-FH1-FH2 dimer show that the leading FH1 can better transfer profilin or profilin-actin, with decreasing probability as the distance from FH2 increases.

Indexed as

Computer SimulationModels, MolecularActinsCarrier ProteinsCytoskeletal ProteinsForminsHumansMicrofilament ProteinsProfilinsProtein DomainsSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsActinsBni1 protein, S cerevisiaeBNR1 protein, S cerevisiaeCarrier ProteinsCytoskeletal ProteinsDiap1 protein, mouseForminsMicrofilament ProteinsProfilinsSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteinsactin polymerizationcoarse grainingforminsintrinsically disordered proteinsmolecular dynamicsprofilin

Identifiers

PMID29754461
PMCPMC6041121
OpenAlexW2803407471

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.