Evidence map›Paper›PMID 29752308›Full record

ArticlePlant physiology2018

A New Phenotyping Pipeline Reveals Three Types of Lateral Roots and a Random Branching Pattern in Two Cereals.

Sixtine Passot, Beatriz Moreno-Ortega, Daniel Moukouanga, Crispulo Balsera, Soazig Guyomarc'h, Mikael Lucas, Guillaume Lobet, Laurent Laplaze, Bertrand Muller, Yann Guédon

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 43 citations in OpenAlex.

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  8. Identifying Developmental Patterns in Structured Plant Phenotyping Data.Methods in molecular biology (Clifton, N.J.) · 2022
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  16. Plasticity of Lateral Root Branching in Maize.Frontiers in plant science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 4 countries.

Sixtine PassotIRD, DIADE, Université de Montpellier, 34394 Montpellier Cedex 5, France.ORCID 0000-0002-6191-723X
Beatriz Moreno-OrtegaCIRAD, AGAP, Université de Montpellier, 34398 Montpellier Cedex 5, France.ORCID 0000-0002-6510-1780
Daniel MoukouangaIRD, DIADE, Université de Montpellier, 34394 Montpellier Cedex 5, France.
Crispulo BalseraInstitut National de la Recherche Agronomique, LEPSE, Montpellier SupAgro, Université de Montpellier, 34060 Montpellier Cedex 2, France.
Soazig Guyomarc'hUniversité de Montpellier, DIADE, 34394 Montpellier Cedex 5, France.ORCID 0000-0001-9327-4737
Mikael LucasIRD, DIADE, Université de Montpellier, 34394 Montpellier Cedex 5, France.
Guillaume LobetAgrosphere IBG3, Forschungszentrum Jülich, 52428 Jülich, Germany.ORCID 0000-0002-5883-4572
Laurent LaplazeIRD, DIADE, Université de Montpellier, 34394 Montpellier Cedex 5, France.ORCID 0000-0002-6568-6504
Bertrand MullerInstitut National de la Recherche Agronomique, LEPSE, Montpellier SupAgro, Université de Montpellier, 34060 Montpellier Cedex 2, France bertrand.muller@inra.fr yann.guedon@cirad.fr.ORCID 0000-0001-6387-9460
Yann GuédonCIRAD, AGAP, Université de Montpellier, 34398 Montpellier Cedex 5, France bertrand.muller@inra.fr yann.guedon@cirad.fr.ORCID 0000-0003-3734-0407
Université de Montpellier · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRForschungszentrum Jülich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent progress in root phenotyping has focused mainly on increasing throughput for genetic studies, while identifying root developmental patterns has been comparatively underexplored. We introduce a new phenotyping pipeline for producing high-quality spatiotemporal root system development data and identifying developmental patterns within these data. The SmartRoot image-analysis system and temporal and spatial statistical models were applied to two cereals, pearl millet (

Indexed as

Image Processing, Computer-AssistedIndoleacetic AcidsMarkov ChainsModels, BiologicalModels, StatisticalPennisetumPlant RootsZea maysIndoleacetic Acids

Identifiers

PMID29752308
PMCPMC6053009
OpenAlexW2800936110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.