Evidence map›Paper›PMID 29749383›Full record

ArticleScientific reports2018

The bipartite mitochondrial genome of Ruizia karukerae (Rhigonematomorpha, Nematoda).

Taeho Kim, Elizabeth Kern, Chungoo Park, Steven A Nadler, Yeon Jae Bae, Joong-Ki Park

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Taeho KimDivision of Environmental Science and Ecological Engineering, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.ORCID 0000-0003-1973-3100
Elizabeth KernDivision of EcoScience, Ewha Womans University, Seoul, 03760, Republic of Korea.
Chungoo ParkSchool of Biological Sciences and Technology, Chonnam National University, Gwangju, 61186, Republic of Korea.ORCID 0000-0002-9545-6654
Steven A NadlerDepartment of Entomology and Nematology, University of California, Davis, CA, 95616, USA.
Yeon Jae BaeDivision of Environmental Science and Ecological Engineering, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Joong-Ki ParkDivision of EcoScience, Ewha Womans University, Seoul, 03760, Republic of Korea. jkpark@ewha.ac.kr.ORCID 0000-0002-0607-3329

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial genes and whole mitochondrial genome sequences are widely used as molecular markers in studying population genetics and resolving both deep and shallow nodes in phylogenetics. In animals the mitochondrial genome is generally composed of a single chromosome, but mystifying exceptions sometimes occur. We determined the complete mitochondrial genome of the millipede-parasitic nematode Ruizia karukerae and found its mitochondrial genome consists of two circular chromosomes, which is highly unusual in bilateral animals. Chromosome I is 7,659 bp and includes six protein-coding genes, two rRNA genes and nine tRNA genes. Chromosome II comprises 7,647 bp, with seven protein-coding genes and 16 tRNA genes. Interestingly, both chromosomes share a 1,010 bp sequence containing duplicate copies of cox2 and three tRNA genes (trnD, trnG and trnH), and the nucleotide sequences between the duplicated homologous gene copies are nearly identical, suggesting a possible recent genesis for this bipartite mitochondrial genome. Given that little is known about the formation, maintenance or evolution of abnormal mitochondrial genome structures, R. karukerae mtDNA may provide an important early glimpse into this process.

Indexed as

Genome, MitochondrialAnimalsDNA, CircularDNA, MitochondrialGenes, MitochondrialNematodaPhylogenyRNA, TransferSequence Analysis, DNADNA, CircularDNA, MitochondrialRNA, Transfer

Identifiers

PMID29749383
PMCPMC5945635

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.