Evidence map›Paper›PMID 29746664›Full record

ArticleNucleic acids research2018

Translational control plays an important role in the adaptive heat-shock response of Streptomyces coelicolor.

Giselda Bucca, Radhika Pothi, Andrew Hesketh, Carla Möller-Levet, David A Hodgson, Emma E Laing, Graham R Stewart, Colin P Smith

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Giselda BuccaSchool of Pharmacy and Biomolecular Sciences, University of Brighton, UK.
Radhika PothiSchool of Biosciences and Medicine, Faculty of Health and Medical Sciences, University of Surrey, UK.
Andrew HeskethSchool of Pharmacy and Biomolecular Sciences, University of Brighton, UK.
Carla Möller-LevetBioinformatics facility, Faculty of Health and Medical Sciences, University of Surrey, UK.
David A HodgsonSchool of Life Sciences, University of Warwick, UK.
Emma E LaingSchool of Biosciences and Medicine, Faculty of Health and Medical Sciences, University of Surrey, UK.
Graham R StewartSchool of Biosciences and Medicine, Faculty of Health and Medical Sciences, University of Surrey, UK.
Colin P SmithSchool of Pharmacy and Biomolecular Sciences, University of Brighton, UK.
University of Surrey · GBUniversity of Brighton · GBUniversity of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D011582
6 · The paper itself

Abstract

Stress-induced adaptations require multiple levels of regulation in all organisms to repair cellular damage. In the present study we evaluated the genome-wide transcriptional and translational changes following heat stress exposure in the soil-dwelling model actinomycete bacterium, Streptomyces coelicolor. The combined analysis revealed an unprecedented level of translational control of gene expression, deduced through polysome profiling, in addition to transcriptional changes. Our data show little correlation between the transcriptome and 'translatome'; while an obvious downward trend in genome wide transcription was observed, polysome associated transcripts following heat-shock showed an opposite upward trend. A handful of key protein players, including the major molecular chaperones and proteases were highly induced at both the transcriptional and translational level following heat-shock, a phenomenon known as 'potentiation'. Many other transcripts encoding cold-shock proteins, ABC-transporter systems, multiple transcription factors were more highly polysome-associated following heat stress; interestingly, these protein families were not induced at the transcriptional level and therefore were not previously identified as part of the stress response. Thus, stress coping mechanisms at the level of gene expression in this bacterium go well beyond the induction of a relatively small number of molecular chaperones and proteases in order to ensure cellular survival at non-physiological temperatures.

Indexed as

Protein BiosynthesisGene Expression Regulation, BacterialHeat-Shock ResponsePolyribosomesStreptomyces coelicolorTranscription, Genetic

Identifiers

PMID29746664
PMCPMC6009599
OpenAlexW2772196916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.