Evidence map›Paper›PMID 29746539›Full record

ArticlePloS one2018

A new "American" subgroup of African-lineage Chikungunya virus detected in and isolated from mosquitoes collected in Haiti, 2016.

Sarah Keller White, Carla Mavian, Marco Salemi, John Glenn Morris, Maha A Elbadry, Bernard A Okech, John A Lednicky, James C Dunford

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
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  6. Diversity and Genetic Reassortment of Keystone Virus in Mosquito Populations in Florida.The American journal of tropical medicine and hygiene · 2023
    Article
  7. Article
  8. Exposure of Egyptian Rousette Bats (Diseases (Basel, Switzerland) · 2022
    Article
  9. Analysis of Zika Virus Sequence Data Associated with a School Cohort in Haiti.The American journal of tropical medicine and hygiene · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Clinical and Epidemiologic Patterns of Chikungunya Virus Infection and Coincident Arboviral Disease in a School Cohort in Haiti, 2014-2015.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sarah Keller WhiteEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.ORCID 0000-0002-6668-3727
Carla MavianEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
Marco SalemiEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
John Glenn MorrisEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
Maha A ElbadryEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
Bernard A OkechEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
John A LednickyEmerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.ORCID 0000-0003-4069-0539
James C DunfordUS Navy and Marine Corps Public Health Center, Portsmouth, Virginia, United States of America.

Funding

Southeastern Regional CoE in Vector-Borne Diseases: The Gateway ProgramU01CK000510 · CK · UNIVERSITY OF FLORIDA · PI DINGLASAN, RHOEL DAVID RAMOS · 2017 to 2018
$10.3M
Recurrence of Cholera in Haiti: Exploration of Contributing Factors and Intervention StrategiesR01AI126357 · NIAID · UNIVERSITY OF FLORIDA · PI John Glenn Morris · 2016 to 2026
$7.3M
NCEZID CDC HHS U01 CK000510NIAID NIH HHS R01 AI126357NIH HHS U01 CK000510
6 · The paper itself

Abstract

As part of on-going arboviral surveillance activity in a semi-rural region in Haiti, Chikungunya virus (CHIKV)-positive mosquito pools were identified in 2014 (the peak of the Caribbean Asian-clade epidemic), and again in 2016 by RT-PCR. In 2014, CHIKV was only identified in Aedes aegypti (11 positive pools/124 screened). In contrast, in sampling in 2016, CHIKV was not identified in Ae. aegypti, but, rather, in (a) a female Aedes albopictus pool, and (b) a female Culex quinquefasciatus pool. Genomic sequence analyses indicated that the CHIKV viruses in the 2016 mosquito pools were from the East-Central-South African (ECSA) lineage, rather than the Asian lineage. In phylogenetic studies, these ECSA lineage strains form a new ECSA subgroup (subgroup IIa) together with Brazilian ECSA lineage strains from an isolated human outbreak in 2014, and a mosquito pool in 2016. Additional analyses date the most recent common ancestor of the ECSA IIa subgroup around May 2007, and the 2016 Haitian CHIKV genomes around December 2015. Known CHIKV mutations associated with improved Ae. albopictus vector competence were not identified. Isolation of this newly identified lineage from Ae. albopictus is of concern, as this vector has a broader geographic range than Ae. aegypti, especially in temperate areas of North America, and stresses the importance for continued vector surveillance.

Indexed as

AedesAnimalsBrazilCaribbean RegionChikungunya FeverChikungunya virusCulexFemaleGenetic LinkageHaitiHumansInsect VectorsMosquito VectorsMutationNorth AmericaPhylogeny

Identifiers

PMID29746539
PMCPMC5944945

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.