Evidence map›Paper›PMID 29745612›Full record

ArticleSheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi2018

[Local helix parameters fitting of proteins based on dual quaternions registration method].

Yonghong Xu, Shaowei Zhang, Jun Jing, Yong Zhao, Feixiang Hou

Abstract readEnglish Abstract
In one paragraph

Article in Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yonghong XuDepartment of Biomedical Engineering, Yanshan University, Qinhuangdao, Hebei 066004, P.R.China.
Shaowei ZhangDepartment of Biomedical Engineering, Yanshan University, Qinhuangdao, Hebei 066004, P.R.China.
Jun JingDepartment of Biomedical Engineering, Yanshan University, Qinhuangdao, Hebei 066004, P.R.China.ydjingjun@ysu.edu.cn.
Yong ZhaoDepartment of Biomedical Engineering, Yanshan University, Qinhuangdao, Hebei 066004, P.R.China.
Feixiang HouDepartment of Biomedical Engineering, Yanshan University, Qinhuangdao, Hebei 066004, P.R.China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A fitting method of calculating local helix parameters of proteins based on dual quaternions registration fitting (DQRFit) is proposed in this paper. First, the C and N atom coordinates of each residue in the protein structure data are extracted. Then the unregistered data and reference data are constructed using the sliding windows. The square sum of the distance of the data points before and after registration is regarded as an optimization goal. We calculate the optimal rotation matrix and the translation vector using the dual quaternion registration algorithm, and get the helix parameters of the secondary structure which contain the number of residues per turn(

Indexed as

dual quaternionshelix parameters fittingregistrationsecondary protein structureα helix detection

Identifiers

PMID29745612
PMCPMC10307546

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.