Evidence map›Paper›PMID 29744598›Full record

ArticlePharmaceutical research2018

Denaturation and Aggregation of Interferon-τ in Aqueous Solution.

Ryan R Manning, Glenn A Wilson, Ryan E Holcomb, Nathaniel J Zbacnik, Auria A Tellechea, Chelsey L Gilley-Dunn, Ryan J Krammes, Nathan S Krammes, Gabriel J Evans, Charles S Henry and 4 more

Abstract read
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In one paragraph

Article in Pharmaceutical research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Ryan R ManningGreat Lakes Bio Design, Charlotte, Michigan, 48813, USA.
Glenn A WilsonWest Coast BioDesign, Santa Barbara, California, USA.
Ryan E HolcombLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Nathaniel J ZbacnikLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Auria A TellecheaLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Chelsey L Gilley-DunnLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Ryan J KrammesLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Nathan S KrammesLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Gabriel J EvansLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Charles S HenryDepartment of Chemistry, Colorado State University, Fort Collins, Colorado, 80523, USA.
Mark Cornell ManningLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Brian M MurphyAlder Biopharmaceuticals, Seattle, Washington, USA.
Robert W PayneLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA.
Derrick S KatayamaLegacy BioDesign LLC, 4630 Sorrel Lane, Johnstown, Colorado, 80534-6404, USA. dkatayama@legacybiodesign.com.ORCID http://orcid.org/0000-0003-4882-2110
Office of Legacy Management · USAlder (United States) · USColorado State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo evaluate the different degrees of residual structure in the unfolded state of interferon-τ using chemical denaturation as a function of temperature by both urea and guanidinium hydrochloride.

methodsAsymmetrical flow field-flow fractionation (AF4) using both UV and multi-angle laser light scattering (MALLS). Flow Microscopy. All subvisible particle imaging measurements were made using a FlowCAM flow imaging system.

resultsThe two different denaturants provided different estimates of the conformational stability of the protein when extrapolated back to zero denaturant concentration. This suggests that urea and guanidinium hydrochloride (GnHCl) produce different degrees of residual structure in the unfolded state of interferon-τ. The differences were most pronounced at low temperature, suggesting that the residual structure in the denatured state is progressively lost when samples are heated above 25°C. The extent of expansion in the unfolded states was estimated from the m-values and was also measured using AF4. In contrast, the overall size of interferon-τ was determined by AF4 to decrease in the presence of histidine, which is known to bind to the native state, thereby providing conformational stabilization. Addition of histidine as the buffer resulted in formation of fewer subvisible particles over time at 50°C. Finally, the thermal aggregation was monitored using AF4 and the rate constants were found to be comparable to those determined previously by SEC and DLS. The thermal aggregation appears to be consistent with a nucleation-dependent mechanism with a critical nucleus size of 4 ± 1.

conclusionChemical denaturation of interferon-τ by urea or GnHCl produces differing amounts of residual structure in the denatured state, leading to differing estimates of conformational stability. AF4 was used to determine changes in size, both upon ligand binding as well as upon denaturation with GnHCl. Histidine appears to be the preferred buffer for interferon-τ, as shown by slower formation of soluble aggregates and reduced levels of subvisible particles when heated at 50°C.

Indexed as

Protein AggregatesProtein DenaturationProtein UnfoldingInterferon Type IPharmaceutical SolutionsPhotoelectron SpectroscopyPregnancy ProteinsWaterinterferon tauInterferon Type IPharmaceutical SolutionsPregnancy ProteinsProtein AggregatesWaterAF4aggregationchaotropesdenaturationflow microscopyguanidinium hydrochlorideinterferon-tauprotein conformational stabilityurea

Identifiers

PMID29744598
OpenAlexW2802231153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.