Evidence map›Paper›PMID 29743612›Full record

ArticleMucosal immunology2018

Modulation of bacterial metabolism by the microenvironment controls MAIT cell stimulation.

Mathias Schmaler, Alessia Colone, Julian Spagnuolo, Michael Zimmermann, Marco Lepore, Artem Kalinichenko, Sumedha Bhatia, Fabien Cottier, Tobias Rutishauser, Norman Pavelka and 8 more

Abstract read
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In one paragraph

Article in Mucosal immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Review
  3. The veterinary quarterly · 2025
    Article
  4. Review
  5. Mucosal-associated invariant T-cells in pulmonary pathophysiology.Current opinion in pulmonary medicine · 2025
    Review
  6. Review
  7. MAIT cells: Conserved watchers on the wall.The Journal of experimental medicine · 2025
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. MAIT cells and the microbiome.Frontiers in immunology · 2023
    Review
  16. MAIT cells and their implication in human oral diseases.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2022
    Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Mathias SchmalerExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Alessia ColoneSingapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore, 138648, Singapore.
Julian SpagnuoloExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Michael ZimmermannInstitute of Molecular Systems Biology, Eidgenössische Technische Hochschule (ETH) Zurich, Zurich, Switzerland.
Marco LeporeExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Artem KalinichenkoExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Sumedha BhatiaSingapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore, 138648, Singapore.
Fabien CottierSingapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore, 138648, Singapore.
Tobias RutishauserExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Norman PavelkaSingapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore, 138648, Singapore.
Adrian EgliApplied Microbiology Research, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland.
Elisa AzzaliDepartment of Food and Drug, University of Parma, Parma, Italy.
Marco PieroniDepartment of Food and Drug, University of Parma, Parma, Italy.
Gabriele CostantinoDepartment of Food and Drug, University of Parma, Parma, Italy.
Petr HruzDepartment of Gastroenterology, University Hospital, Basel, Switzerland.
Uwe SauerInstitute of Molecular Systems Biology, Eidgenössische Technische Hochschule (ETH) Zurich, Zurich, Switzerland.
Lucia MoriExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland. lucia.mori@unibas.ch.
Gennaro De LiberoExperimental Immunology, Department of Biomedicine, University and University Hospital Basel, 4031, Basel, Switzerland. gennaro.delibero@unibas.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mucosal-associated invariant T (MAIT) cells are abundant innate-like T lymphocytes in mucosal tissues and recognize a variety of riboflavin-related metabolites produced by the microbial flora. Relevant issues are whether MAIT cells are heterogeneous in the colon, and whether the local environment influences microbial metabolism thereby shaping MAIT cell phenotypes and responses. We found discrete MAIT cell populations in human colon, characterized by the diverse expression of transcription factors, cytokines and surface markers, indicative of activated and precisely controlled lymphocyte populations. Similar phenotypes were rare among circulating MAIT cells and appeared when circulating MAIT cells were stimulated with the synthetic antigens 5-(2-oxoethylideneamino)-6-D-ribitylaminouracil, and 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil. Furthermore, bacteria grown in colon-resembling conditions with low oxygen tension and harvested at stationary growth phase, potently activated human MAIT cells. The increased activation correlated with accumulation of the above antigenic metabolites as indicated by mass spectrometry. Thus, the colon environment contributes to mucosal immunity by directly affecting bacterial metabolism, and indirectly controlling the stimulation and differentiation of MAIT cells.

Indexed as

Antigens, BacterialCell DifferentiationCells, CulturedCellular MicroenvironmentColonGastrointestinal MicrobiomeHumansImmunity, InnateImmunizationMucosal-Associated Invariant T CellsRiboflavinUracilAntigens, BacterialRiboflavinUracil

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.