Evidence map›Paper›PMID 29743508›Full record

ArticleScientific reports2018

Anomalous Scaling of Gene Expression in Confined Cell-Free Reactions.

Ryota Sakamoto, Vincent Noireaux, Yusuke T Maeda

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Synthetic cells for phage therapy: a perspective.Frontiers in cellular and infection microbiology · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Compartmentalized Cell-Free Expression Systems for Building Synthetic Cells.Advances in biochemical engineering/biotechnology · 2023
    Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Geometric Effect for Biological Reactors and Biological Fluids.Bioengineering (Basel, Switzerland) · 2018
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ryota SakamotoDepartment of Physics, Kyushu University, Motooka 744, Fukuoka, 819-0395, Japan. sakaryo@phys.kyushu-u.ac.jp.ORCID 0000-0002-7762-3682
Vincent NoireauxSchool of Physics and Astronomy, University of Minnesota, 115 Union street, Minneapolis, MN, 55455, USA.
Yusuke T MaedaDepartment of Physics, Kyushu University, Motooka 744, Fukuoka, 819-0395, Japan.ORCID 0000-0001-7848-7654

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellular surface breaks the symmetry of molecular diffusion across membrane. Here, we study how steric interactions between the surface and the bulk of cell-sized emulsion droplets alters gene expression emulated by a cell-free transcription/translation (TXTL) system. The concentration of synthesized reporter proteins in droplets of radius R shows an anomalous geometric scaling of R

Indexed as

Gene Expression RegulationCell-Free SystemCell SizeModels, BiologicalSurface Properties

Identifiers

PMID29743508
PMCPMC5943292

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.