Evidence map›Paper›PMID 29736621›Full record

ArticleNaunyn-Schmiedeberg's archives of pharmacology2018

Molecular basis for the sensitivity of TRP channels to polyunsaturated fatty acids.

Marc Riehle, Dmitry Tsvetkov, Björn-Oliver Gohlke, Robert Preissner, Christian Harteneck, Maik Gollasch, Bernd Nürnberg

Open access · hybridAbstract read
In one paragraph

Article in Naunyn-Schmiedeberg's archives of pharmacology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Marc RiehleDepartment of Pharmacology and Experimental Therapy, Institute of Experimental and Clinical Pharmacology and Toxicology, Eberhard Karls University Hospitals and Clinics and Interfaculty Center of Pharmacogenomics and Drug Research (ICePhA), Wilhelmstrasse 56, 72074, Tübingen, Germany.
Dmitry TsvetkovDepartment of Pharmacology and Experimental Therapy, Institute of Experimental and Clinical Pharmacology and Toxicology, Eberhard Karls University Hospitals and Clinics and Interfaculty Center of Pharmacogenomics and Drug Research (ICePhA), Wilhelmstrasse 56, 72074, Tübingen, Germany.ORCID 0000-0002-6472-971X
Björn-Oliver GohlkeStructural Bioinformatics Group, Institute for Physiology, Charité - University Medicine Berlin, Berlin, Germany.
Robert PreissnerStructural Bioinformatics Group, Institute for Physiology, Charité - University Medicine Berlin, Berlin, Germany.
Christian HarteneckDepartment of Pharmacology and Experimental Therapy, Institute of Experimental and Clinical Pharmacology and Toxicology, Eberhard Karls University Hospitals and Clinics and Interfaculty Center of Pharmacogenomics and Drug Research (ICePhA), Wilhelmstrasse 56, 72074, Tübingen, Germany.
Maik GollaschExperimental and Clinical Research Center (ECRC), a joint cooperation of the Charité University Medicine and Max Delbruck Center for Molecular Medicine in the Helmholtz Association, Lindenberger Weg 80, 13125, Berlin, Germany. maik.gollasch@charite.de.
Bernd NürnbergDepartment of Pharmacology and Experimental Therapy, Institute of Experimental and Clinical Pharmacology and Toxicology, Eberhard Karls University Hospitals and Clinics and Interfaculty Center of Pharmacogenomics and Drug Research (ICePhA), Wilhelmstrasse 56, 72074, Tübingen, Germany. bernd.nuernberg@uni-tuebingen.de.
University of Tübingen · DECharité - Universitätsmedizin Berlin · DEMax Delbrück Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transient receptor potential (TRP) channels represent a superfamily of unselective cation channels that are subdivided into seven subfamilies based on their sequence homology and differences in gating and functional properties. Little is known about the molecular mechanisms of TRP channel regulation, particularly of the "canonical" TRP (TRPC) subfamily and their activation by polyunsaturated fatty acids (PUFAs). Here, we analyzed the structure-function relationship of Drosophila fruit fly TRPC channels. The primary aim was to uncover the molecular basis of PUFA sensitivity of Drosophila TRP-like (TRPL) and TRPgamma channels. Amino acid (aa) sequence alignment of the three Drosophila TRPC channels revealed 50 aa residues highly conserved in PUFA-sensitive TRPL and TRPgamma channels but not in the PUFA-insensitive TRP channel. Substitution of respective aa in TRPL by corresponding aa of TRP identified 18 residues that are necessary for PUFA-mediated activation of TRPL. Most aa positions are located within a stretch comprising transmembrane domains S2-S4, whereas six aa positions have been assigned to the proximal cytosolic C-terminus. Interestingly, residues I465 and S471 are required for activation by 5,8,11,14-eicosatetraynoic acid (ETYA) but not 5,8,11-eicosatriynoic acid (ETI). As proof of concept, we generated a PUFA-sensitive TRP channel by exchanging the corresponding aa from TRPL to TRP. Our study demonstrates a specific aa pattern in the transmembrane domains S2-S4 and the proximal C-terminus essential for TRP channel activation by PUFAs.

Indexed as

CalciumDrosophila ProteinsFatty Acids, UnsaturatedHEK293 CellsHumansMutagenesis, Site-DirectedTransient Receptor Potential ChannelsCalciumDrosophila ProteinsFatty Acids, UnsaturatedTransient Receptor Potential ChannelsCa2+ influxDrosophilaPolyunsaturated fatty acidsTRPC channelsTRP channels

Identifiers

PMID29736621
PMCPMC6061713
OpenAlexW2802789092

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.