Evidence map›Paper›PMID 29736190›Full record

ArticleGenes & nutrition2018

ONS: an ontology for a standardized description of interventions and observational studies in nutrition.

Francesco Vitali, Rosario Lombardo, Damariz Rivero, Fulvio Mattivi, Pietro Franceschi, Alessandra Bordoni, Alessia Trimigno, Francesco Capozzi, Giovanni Felici, Francesco Taglino and 11 more

Abstract read
In one paragraph

Article in Genes & nutrition, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Francesco Vitali *1Institute of Biometeorology (IBIMET), National Research Council (CNR), Via Giovanni Caproni, 8, 50145 Florence, FI Italy.
Rosario Lombardo *2The Microsoft Research - University of Trento Centre for Computational and Systems Biology (COSBI), Piazza Manifattura, 1, I-38068 Rovereto, TN Italy.
Damariz Rivero4Department of Biology, University of Florence, Via Madonna del Piano, 6, 50019 Sesto F, FI Italy.
Fulvio Mattivi5Food Quality and Nutrition Department, Research and Innovation Centre, Edmund Mach Foundation, Via Edmund Mach, 1, 38010 San Michele all'Adige, TN Italy.
Pietro Franceschi5Food Quality and Nutrition Department, Research and Innovation Centre, Edmund Mach Foundation, Via Edmund Mach, 1, 38010 San Michele all'Adige, TN Italy.
Alessandra Bordoni6Department of Agri-Food Sciences and Technologies, University of Bologna, Piazza Goidanich 60, Cesena, FC Italy.
Alessia Trimigno6Department of Agri-Food Sciences and Technologies, University of Bologna, Piazza Goidanich 60, Cesena, FC Italy.
Francesco Capozzi6Department of Agri-Food Sciences and Technologies, University of Bologna, Piazza Goidanich 60, Cesena, FC Italy.
Giovanni Felici7Institute for Systems Analysis and Computer Science (IASI), National Research Council (CNR), Via dei Taurini, 19, 00185 Rome, RM Italy.
Francesco Taglino7Institute for Systems Analysis and Computer Science (IASI), National Research Council (CNR), Via dei Taurini, 19, 00185 Rome, RM Italy.
Franco Miglietta1Institute of Biometeorology (IBIMET), National Research Council (CNR), Via Giovanni Caproni, 8, 50145 Florence, FI Italy.
Nathalie De Cock3Department of Food Technology, Safety and Health, Ghent University, Coupure links 653, 9000 Ghent, Belgium.
Carl Lachat3Department of Food Technology, Safety and Health, Ghent University, Coupure links 653, 9000 Ghent, Belgium.
Bernard De Baets8KERMIT, Department of Data Analysis and Mathematical Modelling, Ghent University, Coupure links 653, 9000 Ghent, Belgium.
Guy De Tré9Department of Telecommunications and Information Processing, Ghent University, Coupure links 653, 9000 Ghent, Belgium.
Mariona Pinart10Molecular Epidemiology Research Group, Max Delbrück Center for Molecular Medicine, Berlin, Germany.
Katharina Nimptsch10Molecular Epidemiology Research Group, Max Delbrück Center for Molecular Medicine, Berlin, Germany.
Tobias Pischon10Molecular Epidemiology Research Group, Max Delbrück Center for Molecular Medicine, Berlin, Germany.
Jildau Bouwman11Microbiology and Systems Biology, TNO, Utrechtseweg 48, 3704HE Zeist, The Netherlands.
Duccio Cavalieri1Institute of Biometeorology (IBIMET), National Research Council (CNR), Via Giovanni Caproni, 8, 50145 Florence, FI Italy.
ENPADASI consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe multidisciplinary nature of nutrition research is one of its main strengths. At the same time, however, it presents a major obstacle to integrate data analysis, especially for the terminological and semantic interpretations that specific research fields or communities are used to. To date, a proper ontology to structure and formalize the concepts used for the description of nutritional studies is still lacking.

resultsWe have developed the Ontology for Nutritional Studies (ONS) by harmonizing selected pre-existing de facto ontologies with novel health and nutritional terminology classifications. The ONS is the result of a scholarly consensus of 51 research centers in nine European countries. The ontology classes and relations are commonly encountered while conducting, storing, harmonizing, integrating, describing, and searching nutritional studies. The ONS facilitates the description and specification of complex nutritional studies as demonstrated with two application scenarios.

conclusionsThe ONS is the first systematic effort to provide a solid and extensible formal ontology framework for nutritional studies. Integration of new information can be easily achieved by the addition of extra modules (i.e., nutrigenomics, metabolomics, nutrikinetics, and quality appraisal). The ONS provides a unified and standardized terminology for nutritional studies as a resource for nutrition researchers who might not necessarily be familiar with ontologies and standardization concepts.

Indexed as

BiomarkerDatabasesFood intakeHealthIntervention studyMetabolomicsNutritionObservational studyOntology

Identifiers

PMID29736190
PMCPMC5928560

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.