Evidence map›Paper›PMID 29729833›Full record

ArticleBiophysical journal2018

Compaction of Single-Molecule Megabase-Long Chromatin under the Influence of Macromolecular Crowding.

Anatoly Zinchenko, Nikolay V Berezhnoy, Qinming Chen, Lars Nordenskiöld

Abstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
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  7. Review
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  10. Review
  11. Organization of fast and slow chromatin revealed by single-nucleosome dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anatoly ZinchenkoGraduate School of Environmental Studies, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan; School of Biological Sciences, Nanyang Technological University, Singapore, Singapore. Electronic address: zinchenko@urban.env.nagoya-u.ac.jp.
Nikolay V BerezhnoySchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Qinming ChenSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Lars NordenskiöldSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore. Electronic address: larsnor@ntu.edu.sg.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The megabase-sized length of chromatin is highly relevant to the state of chromatin in vivo, where it is subject to a highly crowded environment and is organized in topologically associating domains of similar dimension. We developed an in vitro experimental chromatin model system reconstituted from T4 DNA (approximately 166 kbp) and histone octamers and studied the monomolecular compaction of this megabase-sized chromatin fiber under the influence of macromolecular crowding. We used single-molecule fluorescence microscopy and observed compaction in aqueous solutions containing poly(ethylene glycol) in the presence of monovalent (Na

Indexed as

Bacteriophage T4ChromatinDNA, ViralHistonesHumansMagnesiumNucleosomesPolyethylene GlycolsSodiumChromatinDNA, ViralHistonesMagnesiumNucleosomesPolyethylene GlycolsSodium

Identifiers

PMID29729833
PMCPMC6129467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.