Evidence map›Paper›PMID 29729188›Full record

ArticleAllergy2018

Atopic asthma after rhinovirus-induced wheezing is associated with DNA methylation change in the SMAD3 gene promoter.

R J Lund, M Osmala, M Malonzo, M Lukkarinen, A Leino, J Salmi, S Vuorikoski, R Turunen, T Vuorinen, C Akdis and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Allergy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Asthma-Genomic Advances Toward Risk Prediction.Clinics in chest medicine · 2024
    Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Viral Infection and Airway Epithelial Immunity in Asthma.International journal of molecular sciences · 2022
    Review
  10. Gene-environment interactions in childhood asthma revisited; expanding the interaction concept.Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology · 2022
    Review
  11. Review
  12. Review
  13. Observational
  14. Article
  15. ERJ open research · 2021
    Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. The Airway Epithelium-A Central Player in Asthma Pathogenesis.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

R J LundTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.ORCID 0000-0002-1068-5918
M OsmalaDepartment of Information and Computer Science, Aalto University, Helsinki, Finland.
M MalonzoDepartment of Information and Computer Science, Aalto University, Helsinki, Finland.
M LukkarinenDepartment of Paediatrics and Adolescent Medicine, Turku University Hospital, University of Turku, Turku, Finland.
A LeinoDepartment of Paediatrics and Adolescent Medicine, Turku University Hospital, University of Turku, Turku, Finland.ORCID 0000-0002-2828-7483
J SalmiTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
S VuorikoskiTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
R TurunenDepartment of Paediatrics and Adolescent Medicine, Turku University Hospital, University of Turku, Turku, Finland.
T VuorinenDepartment of Virology, University of Turku, Turku, Finland.
C AkdisSwiss Institute of Allergy and Asthma Research (SIAF), Christine Kühne-Center for Allergy Research and Education (CK-CARE), University of Zürich, Davos, Switzerland.
H LähdesmäkiDepartment of Information and Computer Science, Aalto University, Helsinki, Finland.
R LahesmaaTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
T JarttiDepartment of Paediatrics and Adolescent Medicine, Turku University Hospital, University of Turku, Turku, Finland.ORCID 0000-0003-2748-5362
University of Turku · FIÅbo Akademi University · FIAalto University · FIUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Children with rhinovirus-induced severe early wheezing have an increased risk of developing asthma later in life. The exact molecular mechanisms for this association are still mostly unknown. To identify potential changes in the transcriptional and epigenetic regulation in rhinovirus-associated atopic or nonatopic asthma, we analyzed a cohort of 5-year-old children (n = 45) according to the virus etiology of the first severe wheezing episode at the mean age of 13 months and to 5-year asthma outcome. The development of atopic asthma in children with early rhinovirus-induced wheezing was associated with DNA methylation changes at several genomic sites in chromosomal regions previously linked to asthma. The strongest changes in atopic asthma were detected in the promoter region of SMAD3 gene at chr 15q22.33 and introns of DDO/METTL24 genes at 6q21. These changes were validated to be present also at the average age of 8 years.

Indexed as

RhinovirusAsthmaChildChild, PreschoolD-Aspartate OxidaseDNA MethylationEpigenesis, GeneticFemaleFinlandFollow-Up StudiesHospitals, UniversityHumansInfantMaleMethyltransferasesPicornaviridae InfectionsD-Aspartate OxidaseDDO protein, humanMethyltransferasesMETTL24 protein, humanSmad3 ProteinSMAD3 protein, humanasthmaepigenomerhinovirustranscriptomewheezing

Identifiers

PMID29729188
PMCPMC6055882
OpenAlexW2802454204

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.