Evidence map›Paper›PMID 29728652›Full record

ArticleNature structural & molecular biology2018

Defective germline reprogramming rewires the spermatogonial transcriptome.

Lina Vasiliauskaitė, Rebecca V Berrens, Ivayla Ivanova, Claudia Carrieri, Wolf Reik, Anton J Enright, Dónal O'Carroll

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Genome-wide DNA methylation changes in human spermatogenesis.American journal of human genetics · 2024
    Article
  7. Article
  8. Epigenetic Factors and ncRNAs in Testicular Cancer.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Retrotransposons in the Mammalian Male Germline.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2022
    Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lina VasiliauskaitėMRC Centre for Regenerative Medicine, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0000-0003-0926-3862
Rebecca V BerrensEpigenetics Programme, Babraham Institute, Cambridge, UK.ORCID http://orcid.org/0000-0003-1224-8030
Ivayla IvanovaMRC Centre for Regenerative Medicine, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Claudia CarrieriMRC Centre for Regenerative Medicine, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Wolf ReikEpigenetics Programme, Babraham Institute, Cambridge, UK.
Anton J EnrightEuropean Bioinformatics Institute, Hinxton, UK.ORCID http://orcid.org/0000-0002-6090-3100
Dónal O'CarrollMRC Centre for Regenerative Medicine, School of Biological Sciences, University of Edinburgh, Edinburgh, UK. donal.ocarroll@ed.ac.uk.ORCID http://orcid.org/0000-0002-8626-2217

Funding

European Research Council 310206Medical Research Council MR/K017047/1
6 · The paper itself

Abstract

Defective germline reprogramming in Piwil4 (Miwi2)- and Dnmt3l-deficient mice results in the failure to reestablish transposon silencing, meiotic arrest and progressive loss of spermatogonia. Here we sought to understand the molecular basis for this spermatogonial dysfunction. Through a combination of imaging, conditional genetics and transcriptome analysis, we demonstrate that germ cell elimination in the respective mutants arises as a result of defective de novo genome methylation during reprogramming rather than because of a function for the respective factors within spermatogonia. In both Miwi2

Indexed as

AnimalsArgonaute ProteinsCells, CulturedCellular ReprogrammingDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Transposable ElementsGenes, Intracisternal A-ParticleMaleMeiosisMiceMice, Inbred C57BLMice, KnockoutSpermatogoniaTranscriptomeArgonaute ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA Transposable ElementsDnmt3l protein, mousePIWIL4 protein, mouse

Identifiers

PMID29728652
PMCPMC6086329

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.