Evidence map›Paper›PMID 29728651›Full record

SynthesisNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2018

Common variants on 6q16.2, 12q24.31 and 16p13.3 are associated with major depressive disorder.

Xiaoyan Li, Zhenwu Luo, Chunjie Gu, Lynsey S Hall, Andrew M McIntosh, Yanni Zeng, David J Porteous, Caroline Hayward, Ming Li, Yong-Gang Yao and 3 more

Open access · bronzeAbstract readMeta-AnalysisReview
In one paragraph

Synthesis in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 4 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 4 syntheses or guidelines pooled it, 42 citations in OpenAlex.

  1. Pooled it
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  14. The Association BetweenFrontiers in pharmacology · 2021
    Article
  15. Identification of theThe Journal of international medical research · 2020
    Article
  16. Identification of a functional human-unique 351-bp Alu insertion polymorphism associated with major depressive disorder in the 1p31.1 GWAS risk loci.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2020
    Article
  17. Article
  18. Review
  19. Integration of GWAS and brain eQTL identifies FLOT1 as a risk gene for major depressive disorder.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2019
    Article
  20. Integrative analyses of major histocompatibility complex loci in the genome-wide association studies of major depressive disorder.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Xiaoyan LiKey Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China.
Zhenwu LuoDepartment of Microbiology and Immunology, Medical University of South Carolina, Charleston, SC, 29425, USA.
Chunjie GuKey Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China.
Lynsey S HallDivision of Psychiatry, University of Edinburgh, Edinburgh, UK.
Andrew M McIntoshDivision of Psychiatry, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0000-0002-0198-4588
Yanni ZengDivision of Psychiatry, University of Edinburgh, Edinburgh, UK.
David J PorteousCentre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK.
Caroline HaywardMRC Human Genetic Unit, IGMM, University of Edinburgh, Edinburgh, UK.
Ming LiKey Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China.ORCID http://orcid.org/0000-0002-8197-6552
Yong-Gang YaoKey Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China.
Chen ZhangDivision of Mood Disorders, Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China. zhangchen645@163.com.
Xiong-Jian LuoKey Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China. luoxiongjian@mail.kiz.ac.cn.ORCID http://orcid.org/0000-0003-2543-8845
23andMe Research Team7
Kunming Institute of Zoology · CNInstitute of Genetics and Cancer · GBUniversity of Edinburgh · GBMedical University of South Carolina · USShanghai Jiao Tong University · CNWestern General Hospital · GB

Funding

Medical Research Council MC_UU_00007/10Medical Research Council MR/K026992/1Wellcome Trust
6 · The paper itself

Abstract

Accumulating evidence suggests that genetic factors have a role in major depressive disorder (MDD). However, only limited MDD risk loci have been identified so far. Here we perform a meta-analysis (a total of 90,150 MDD cases and 246,603 controls) through combing three genome-wide association studies of MDD, including 23andMe (cases were self-reported with a clinical diagnosis or treatment of depression), CONVERGE (cases were diagnosed using the Composite International Diagnostic Interview) and PGC (cases were diagnosed using direct structured diagnostic interview (by trained interviewers) or clinician-administered DSM-IV checklists). Genetic variants from two previously unreported loci (rs10457592 on 6q16.2 and rs2004910 on 12q24.31) showed significant associations with MDD (P < 5 × 10

Indexed as

Brain ChemistryChromosomes, HumanDiagnostic and Statistical Manual of Mental DisordersF-Box ProteinsGene ExpressionGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansMajor Depressive DisorderNuclear ProteinsPolymorphism, Single NucleotideRisk AssessmentUbiquitin-Protein LigasesF-Box ProteinsFbxL4 protein, humanNuclear ProteinsRSRC1 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID29728651
PMCPMC6098070
OpenAlexW2801366487

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.