Evidence map›Paper›PMID 29728606›Full record

ArticleNature communications2018

Structure and mechanism of the two-component α-helical pore-forming toxin YaxAB.

Bastian Bräuning, Eva Bertosin, Florian Praetorius, Christian Ihling, Alexandra Schatt, Agnes Adler, Klaus Richter, Andrea Sinz, Hendrik Dietz, Michael Groll

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Cryo-EM structure of detergent-boundbioRxiv : the preprint server for biology · 2026
    Article
  2. Purification and Oligomerization of YaxAB Nanopores.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Structure of theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Bacterial pore-forming toxins.Microbiology (Reading, England) · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. A tripartite cytolytic toxin formed byProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Bastian BräuningCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Chair of Biochemistry, Technische Universität München, Lichtenbergstrasse 4, 85747, Garching, Germany. bastian.braeuning@tum.de.ORCID http://orcid.org/0000-0002-7194-2500
Eva BertosinCenter for Integrated Protein Science Munich (CIPSM), Department of Physics, Technische Universität München, Am Coulombwall 4a, 85748, Garching, Germany.
Florian PraetoriusCenter for Integrated Protein Science Munich (CIPSM), Department of Physics, Technische Universität München, Am Coulombwall 4a, 85748, Garching, Germany.ORCID http://orcid.org/0000-0002-0806-8101
Christian IhlingDepartment of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Martin-Luther University Halle-Wittenberg, Wolfgang-Langenbeck-Str.4, 06120, Halle/Saale, Germany.
Alexandra SchattDepartment of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Martin-Luther University Halle-Wittenberg, Wolfgang-Langenbeck-Str.4, 06120, Halle/Saale, Germany.
Agnes AdlerCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Chair of Biochemistry, Technische Universität München, Lichtenbergstrasse 4, 85747, Garching, Germany.
Klaus RichterCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Chair of Biotechnology, Technische Universität München, Lichtenbergstrasse 4, 85747, Garching, Germany.
Andrea SinzDepartment of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Martin-Luther University Halle-Wittenberg, Wolfgang-Langenbeck-Str.4, 06120, Halle/Saale, Germany.ORCID http://orcid.org/0000-0003-1521-4899
Hendrik DietzCenter for Integrated Protein Science Munich (CIPSM), Department of Physics, Technische Universität München, Am Coulombwall 4a, 85748, Garching, Germany.
Michael GrollCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Chair of Biochemistry, Technische Universität München, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID http://orcid.org/0000-0002-1660-340X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pore-forming toxins (PFT) are virulence factors that transform from soluble to membrane-bound states. The Yersinia YaxAB system represents a family of binary α-PFTs with orthologues in human, insect, and plant pathogens, with unknown structures. YaxAB was shown to be cytotoxic and likely involved in pathogenesis, though the molecular basis for its two-component lytic mechanism remains elusive. Here, we present crystal structures of YaxA and YaxB, together with a cryo-electron microscopy map of the YaxAB complex. Our structures reveal a pore predominantly composed of decamers of YaxA-YaxB heterodimers. Both subunits bear membrane-active moieties, but only YaxA is capable of binding to membranes by itself. YaxB can subsequently be recruited to membrane-associated YaxA and induced to present its lytic transmembrane helices. Pore formation can progress by further oligomerization of YaxA-YaxB dimers. Our results allow for a comparison between pore assemblies belonging to the wider ClyA-like family of α-PFTs, highlighting diverse pore architectures.

Indexed as

Protein Conformation, alpha-HelicalProtein MultimerizationAnimalsBacterial ToxinsCryoelectron MicroscopyHumansModels, MolecularMultiprotein ComplexesPore Forming Cytotoxic ProteinsVirulenceYersiniaYersinia InfectionsBacterial ToxinsMultiprotein ComplexesPore Forming Cytotoxic Proteins

Identifiers

PMID29728606
PMCPMC5935710

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.