ArticleScientific reports2018
Genome-wide analysis of the SPL/miR156 module and its interaction with the AP2/miR172 unit in barley.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.
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Who cites it
45 citing papers in PubMed, 1 synthesis or guideline pooled it, 81 citations in OpenAlex.
- What Do We Know about Barley miRNAs?International journal of molecular sciences · 2022Pooled it
- Advances in the Functions and Molecular Mechanisms of SPL Transcription Factors in Plant Flower Development.Plants (Basel, Switzerland) · 2026Review
- Engineering crop determinacy: CRISPR/Cas based advances in self-pruning gene function and application.Molecular biology reports · 2026Review
- Genome-wide analysis of Phaseolus vulgaris L. miR172 gene family members under heavy metal stress.BMC genomics · 2026Article
- Genome-wide identification and expression profiling of the SBP/miR156 module in response to pathogen stress in sisal (Frontiers in plant science · 2026Article
- Dynamic transcriptomic features accompanying the onset of first flowering in roses.BMC plant biology · 2025Article
- Genome-wide identification and expression analysis of the SPL transcription factor family and its expression characteristics in Elymus sibiricus.BMC plant biology · 2025Article
- TaIRE1-mediated unconventional splicing of the TabZIP60 mRNA and the miR172 precursor regulates heat stress tolerance in wheat.Journal of integrative plant biology · 2025Article
- Genome-wide analysis of miR172-mediated response to heavy metal stress in chickpea (Cicer arietinum L.): physiological, biochemical, and molecular insights.BMC plant biology · 2024Article
- Genome-wide identification and expression analysis of two-component system genes in switchgrass (Panicum virgatum L.).BMC plant biology · 2024Article
- Genome-Wide Identification and Expression Analysis of the Casparian Strip Membrane Domain Protein-like Gene Family in Peanut (Plants (Basel, Switzerland) · 2024Article
- The Biosynthesis Process of Small RNA and Its Pivotal Roles in Plant Development.International journal of molecular sciences · 2024Review
- Differential expression and global analysis of miR156/SQUAMOSA promoter binding-like proteins (SPL) module in oat.Scientific reports · 2024Article
- Genome-wide identification, evolution, and role of SPL gene family in beet (Beta vulgaris L.) under cold stress.BMC genomics · 2024Article
- Regulatory mechanism of the miR172e-LbrAP2 module during the vegetative growth phase transition in Lilium.Planta · 2023Article
- The Competing Endogenous RNAs Regulatory Genes Network Mediates Leaf Shape Variation and Main Effector Gene Function in Mulberry Plant (International journal of molecular sciences · 2023Article
- Genome-Wide Identification and Expression Analysis of the SPL Gene Family in Three Orchids.International journal of molecular sciences · 2023Article
- Study on the Flower Induction Mechanism ofInternational journal of molecular sciences · 2023Article
- TheGenes · 2023Article
- Genome-wide dissection of AT-hook motif nuclear-localized gene family and their expression profiling for drought and salt stress in rice (Frontiers in plant science · 2023Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The SQUAMOSA-promoter binding like (SPL) gene family encodes transcription factors that have been shown in many species to influence plant growth and development, but information about these genes in barley (Hordeum vulgare L.) is limited. This study identified 17 barley SPL genes, within eight distinct groups, that are orthologs of SPL genes described in Arabidopsis, wheat, and rice. Sixteen barley SPLs undergo alternative splicing. Seven SPLs contain a putative miR156 target site and the transcript levels of the miR156-targeted HvSPLs (HvSPL3, 13 and 23) were lower in vegetative than in reproductive phase but this was true also for some SPL genes such as HvSPL6 that were not regulated by miR156. Because SPL gene products regulate miR172, which is also involved in floral development, the expression of miR172 was studied. An antagonistic expression pattern of miR156 and miR172b during the vegetative and the reproductive phases signifies their apparent function in barley growth phase transition. Characterization of a barley mir172 mutant having an abnormal, indeterminate spikelet phenotype suggests the possible feedback role of AP2/miR172 module on HvSPL genes. This is the first comprehensive analysis of the miR156/SPL/miR172 axis in barley that provides a basis to elucidate their roles in various biological processes.
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