Evidence map›Paper›PMID 29725811›Full record

ArticleMycopathologia2018

Genetic Diversity and Antifungal Susceptibility of Candida parapsilosis Sensu Stricto Isolated from Bloodstream Infections in Turkish Patients.

Süleyha Hilmioğlu-Polat, Somayeh Sharifynia, Yasemin Öz, Müge Aslan, Nuray Gündoğdu, Ayşe Serin, Haleh Rafati, Faezeh Mohammadi, Dilek Yeşim-Metin, Aylin Döğen and 2 more

Abstract read
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In one paragraph

Article in Mycopathologia, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Global Prevalence of Antifungal-ResistantTropical medicine and infectious disease · 2022
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 4 countries.

Süleyha Hilmioğlu-PolatDepartment of Microbiology, Faculty of Medicine, University of Ege, Izmir, Turkey.
Somayeh SharifyniaClinical Tuberculosis and Epidemiology Research Center, National Research Institute of Tuberculosis and Lung Diseases (NRITLD), Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Yasemin ÖzDivision of Mycology, Department of Microbiology, Faculty of Medicine, University of Eskisehir Osmangazi, Eskisehir, Turkey.
Müge AslanDivision of Mycology, Department of Microbiology, Faculty of Medicine, University of Eskisehir Osmangazi, Eskisehir, Turkey.
Nuray GündoğduDivision of Mycology, Department of Microbiology, Faculty of Medicine, University of Eskisehir Osmangazi, Eskisehir, Turkey.
Ayşe SerinDepartment of Forensic Science, Faculty of Medicine, University of Çukurova, Adana, Turkey.
Haleh RafatiDepartment of Microbiology and Immunology, Center of Excellence for Infection Biology and Antimicrobial Pharmacology, Tehran, Iran.
Faezeh MohammadiDepartment of Medical Parasitology and Mycology, School of Medicine, Qazvin University of Medical Sciences, Qazvin, Iran.
Dilek Yeşim-MetinDepartment of Microbiology, Faculty of Medicine, University of Ege, Izmir, Turkey.
Aylin DöğenDepartment of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Mersin, Mersin, Turkey.
Macit IlkitDivision of Mycology, Department of Microbiology, Faculty of Medicine, University of Çukurova, Adana, Turkey.
Seyedmojtaba SeyedmousaviDepartment of Microbiology and Immunology, Center of Excellence for Infection Biology and Antimicrobial Pharmacology, Tehran, Iran. S.Seyedmousavi@gmail.com.ORCID http://orcid.org/0000-0002-6194-7447
Eskişehir Osmangazi University · TRCukurova University · TREge University · TRMasih Daneshvari Hospital · IRMersin Üniversitesi · TRQazvin University of Medical Sciences · IRRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida parapsilosis sensu stricto is an emerging cause of hospital-acquired Candida infections, predominantly in southern Europe, South America, and Asia. We investigated the genetic diversity and antifungal susceptibility profile of 170 independent C. parapsilosis sensu stricto strains obtained from patients with candidemia who were treated at the Ege University Hospital in Izmir, Turkey, between 2006 and 2014. The identity of each strain was confirmed via PCR amplification and digestion of the secondary alcohol dehydrogenase-encoding gene. The 24-h geometric mean minimum inhibitory concentrations of the antifungal agents, in increasing order, were as follows: posaconazole, 0.10 µg/mL; voriconazole, 0.21 µg/mL; caspofungin, 0.38 µg/mL; amphotericin B, 0.61 µg/mL; anidulafungin, 0.68 µg/mL; and fluconazole, 2.95 µg/mL. Microsatellite genotyping of the isolates (using fluorescently labeled primers and a panel of four different short-nucleotide repeat fragments) identified 25, 17, 17, and 8 different allelic genotypes at the CP6, B5, CP4, and CP1 locus, respectively. Posaconazole, caspofungin, and amphotericin B showed the greatest in vitro activity of the tested systemic azole, echinocandin, and polyene agents, respectively, and the observed antifungal susceptibility of the isolates was shown to be independent of their isolation source. We obtained a combined discriminatory power of 0.99 with a total of 130 genotypes for 170 isolates tested. Finally, microsatellite profiling analysis confirmed the presence of identical genotype between separate isolates, supporting that effective surveillance and infection-prevention programs are essential to limit the impact of C. parapsilosis sensu stricto on hospitalized patients' health.

Indexed as

Drug Resistance, FungalGenetic VariationAlcohol DehydrogenaseAntifungal AgentsCandida parapsilosisCandidemiaFungal ProteinsGenotypeHospitals, UniversityHumansMicrobial Sensitivity TestsMicrosatellite RepeatsPolymerase Chain ReactionTurkeyAlcohol DehydrogenaseAntifungal AgentsFungal ProteinsAmphotericin BAntifungal susceptibilityCandida parapsilosisCaspofunginMicrosatellite genotypingPosaconazole

Identifiers

PMID29725811
OpenAlexW2799702026

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.