Evidence map›Paper›PMID 29725011›Full record

ArticleNature communications2018

Gut microbiomes of wild great apes fluctuate seasonally in response to diet.

Allison L Hicks, Kerry Jo Lee, Mara Couto-Rodriguez, Juber Patel, Rohini Sinha, Cheng Guo, Sarah H Olson, Anton Seimon, Tracie A Seimon, Alain U Ondzie and 5 more

Abstract readComparative Study
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 146 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
146citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

146 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  20. Distribution and prevalence ofJournal of medical microbiology · 2025
    Article

86 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Allison L HicksCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Kerry Jo LeeCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Mara Couto-RodriguezCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Juber PatelCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Rohini SinhaCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Cheng GuoCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Sarah H OlsonWildlife Conservation Society, Wildlife Health Program, Bronx, NY, 10460, USA.
Anton SeimonDepartment of Geography and Planning, Appalachian State University, Boone, NC, 28608, USA.
Tracie A SeimonCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Alain U OndzieWildlife Conservation Society, Wildlife Health Program, Bronx, NY, 10460, USA.
William B KareshWildlife Conservation Society, Global Health Program, Bronx, NY, 10460, USA.
Patricia ReedWildlife Conservation Society, Wildlife Health Program, Bronx, NY, 10460, USA.
Kenneth N CameronWildlife Conservation Society, Wildlife Health Program, Bronx, NY, 10460, USA.
W Ian LipkinCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
Brent L WilliamsCenter for Infection and Immunity, Columbia University, New York, NY, 10032, USA. bw2101@cumc.columbia.edu.ORCID http://orcid.org/0000-0003-2740-5051

Funding

Translational CoreU19AI109761 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BARIC, RALPH S · 2014 to 2018
$32.6M
NIAID NIH HHS U19 AI109761NIH HHS U19AI109761
6 · The paper itself

Abstract

The microbiome is essential for extraction of energy and nutrition from plant-based diets and may have facilitated primate adaptation to new dietary niches in response to rapid environmental shifts. Here we use 16S rRNA sequencing to characterize the microbiota of wild western lowland gorillas and sympatric central chimpanzees and demonstrate compositional divergence between the microbiotas of gorillas, chimpanzees, Old World monkeys, and modern humans. We show that gorilla and chimpanzee microbiomes fluctuate with seasonal rainfall patterns and frugivory. Metagenomic sequencing of gorilla microbiomes demonstrates distinctions in functional metabolic pathways, archaea, and dietary plants among enterotypes, suggesting that dietary seasonality dictates shifts in the microbiome and its capacity for microbial plant fiber digestion versus growth on mucus glycans. These data indicate that great ape microbiomes are malleable in response to dietary shifts, suggesting a role for microbiome plasticity in driving dietary flexibility, which may provide fundamental insights into the mechanisms by which diet has driven the evolution of human gut microbiomes.

Indexed as

Gastrointestinal MicrobiomeSeasonsAnimal Nutritional Physiological PhenomenaAnimalsCercopithecidaeDietFecesFemaleGorilla gorillaHerbivoryHumansMaleMetabolic Networks and PathwaysPan troglodytesRNA, Ribosomal, 16SSpecies SpecificityRNA, Ribosomal, 16S

Identifiers

PMID29725011
PMCPMC5934369

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.