Evidence map›Paper›PMID 29722872›Full record

ArticleNucleic acids research2018

ComM is a hexameric helicase that promotes branch migration during natural transformation in diverse Gram-negative species.

Thomas M Nero, Triana N Dalia, Joseph Che-Yen Wang, David T Kysela, Matthew L Bochman, Ankur B Dalia

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. DprA recruits ComM to facilitate recombination during natural transformation in Gram-negative bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. SbcB facilitates natural transformation inJournal of bacteriology · 2025
    Article
  5. Review
  6. Article
  7. Evolution and spread ofMicrobial genomics · 2025
    Article
  8. Article
  9. Article
  10. Manipulation of natural transformation by AbaR-type islands promotes fixation of antibiotic resistance inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The RecA-directed recombination pathway of natural transformation initiates at chromosomal replication forks in the pneumococcus.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Motor-independent retraction of type IV pili is governed by an inherent property of the pilus filament.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Thomas M NeroDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Triana N DaliaDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Joseph Che-Yen WangElectron Microscopy Center, Indiana University, Bloomington, IN 47405, USA.
David T KyselaDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Matthew L BochmanMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN 47405, USA.
Ankur B DaliaDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Indiana University Bloomington · US

Funding

Mechanisms and regulation of horizontal gene transfer by natural transformation in Vibrio choleraeR35GM128674 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI Ankur Dalia · 2018 to 2026
$3.8M
Bacterial Subcellular Organization and its Impact on Growth, Development, Aging, and Surface AdhesionR35GM122556 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BRUN, YVES V · 2017 to 2019
$1.6M
Microfluidic Devices for Studying the Development and Aging of BacteriaR01GM113121 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI JACOBSON, STEPHEN C · 2016 to 2019
$1.1M
Vibrio cholerae-chitin interactions and their role in cholera transmission and evolutionK22AI118863 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI DALIA, ANKUR · 2016 to 2017
$268k
NIAID NIH HHS K22 AI118863NIGMS NIH HHS R01 GM113121NIGMS NIH HHS R35 GM122556NIGMS NIH HHS R35 GM128674
6 · The paper itself

Abstract

Acquisition of foreign DNA by natural transformation is an important mechanism of adaptation and evolution in diverse microbial species. Here, we characterize the mechanism of ComM, a broadly conserved AAA+ protein previously implicated in homologous recombination of transforming DNA (tDNA) in naturally competent Gram-negative bacterial species. In vivo, we found that ComM was required for efficient comigration of linked genetic markers in Vibrio cholerae and Acinetobacter baylyi, which is consistent with a role in branch migration. Also, ComM was particularly important for integration of tDNA with increased sequence heterology, suggesting that its activity promotes the acquisition of novel DNA sequences. In vitro, we showed that purified ComM binds ssDNA, oligomerizes into a hexameric ring, and has bidirectional helicase and branch migration activity. Based on these data, we propose a model for tDNA integration during natural transformation. This study provides mechanistic insight into the enigmatic steps involved in tDNA integration and uncovers the function of a protein required for this conserved mechanism of horizontal gene transfer.

Indexed as

Transformation, GeneticAcinetobacterAdenosine TriphosphateBacterial ProteinsDNADNA, BacterialDNA-Binding ProteinsDNA HelicasesDNA RepairDNA, Single-StrandedGene Transfer, HorizontalGram-Negative BacteriaProtein MultimerizationVibrio choleraeAdenosine TriphosphateBacterial ProteinsDNADNA, BacterialDNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedRadA protein, bacteria

Identifiers

PMID29722872
PMCPMC6158740
OpenAlexW2951002266

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.