Evidence map›Paper›PMID 29721955›Full record

ArticleAdvances in experimental medicine and biology2018

How Excessive cGMP Impacts Metabolic Proteins in Retinas at the Onset of Degeneration.

Jianhai Du, Jie An, Jonathan D Linton, Yekai Wang, James B Hurley

Abstract read
In one paragraph

Article in Advances in experimental medicine and biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Mass spectrometry-based retina proteomics.Mass spectrometry reviews · 2023
    Review
  5. IMPDH dysregulation in disease: a mini review.Biochemical Society transactions · 2022
    Review
  6. Article
  7. New focus on regulation of the rod photoreceptor phosphodiesterase.Current opinion in structural biology · 2021
    Review
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jianhai DuDepartments of Ophthalmology, and Biochemistry, West Virginia University, Morgantown, WV, USA.
Jie AnDepartment of Medicine, University of Washington, Seattle, WA, USA.
Jonathan D LintonDepartment of Ophthalmology, University of Washington, Seattle, WA, USA.
Yekai WangDepartments of Ophthalmology, and Biochemistry, West Virginia University, Morgantown, WV, USA.
James B HurleyDepartment of Ophthalmology, University of Washington, Seattle, WA, USA. jbhhh@u.washington.edu.
University of Washington · USWest Virginia University · US

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1985 to 2026
$23.5M
ROD AND CONE RESPONSE CHARACTERISTICSR01EY006641 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1986 to 2026
$10.2M
Control of Photoreceptor MetabolismR01EY017863 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 2007 to 2026
$6.4M
Human RPE metabolism and metabolite transportR01EY026030 · NEI · UNIVERSITY OF WASHINGTON · PI CHAO, JENNIFER RAYMING, DU, JIANHAI · 2016 to 2020
$2.1M
BINDING OF EXPRESSED ARRESTIN TO RHODOPSINF32EY006641 · NEI · UNIVERSITY OF FLORIDA · PI POPP, MICHAEL P · 1995 to 1997
–
NEI NIH HHS F32 EY006641NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY006641NEI NIH HHS R01 EY017863NEI NIH HHS R01 EY026030
6 · The paper itself

Abstract

Aryl-hydrocarbon receptor interacting protein-like 1 (AIPL1) is essential to stabilize cGMP phosphodiesterase 6 (PDE6) in rod photoreceptors. Mutation of AIPL1 leads to loss of PDE6, accumulation of intracellular cGMP, and rapid degeneration of rods. To understand the metabolic basis for the photoreceptor degeneration caused by excessive cGMP, we performed proteomics and phosphoproteomics analyses on retinas from AIPL1-/- mice at the onset of rod cell death. AIPL1-/- retinas have about 18 times less than normal PDE6a and no detectable PDE6b. We identified twelve other proteins and thirty-nine phosphorylated proteins related to cell metabolism that are significantly altered preceding the massive degeneration of rods. They include transporters, kinases, phosphatases, transferases, and proteins involved in mitochondrial bioenergetics and metabolism of glucose, lipids, amino acids, nucleotides, and RNA. In AIPLI-/- retinas mTOR and proteins involved in mitochondrial energy production and lipid synthesis are more dephosphorylated, but glycolysis proteins and proteins involved in leucine catabolism are more phosphorylated than in normal retinas. Our findings indicate that elevating cGMP rewires cellular metabolism prior to photoreceptor degeneration and that targeting metabolism may be a productive strategy to prevent or slow retinal degeneration.

Indexed as

Protein Processing, Post-TranslationalAdaptor Proteins, Signal TransducingAnimalsCyclic GMPCyclic Nucleotide Phosphodiesterases, Type 6Energy MetabolismEye ProteinsMiceMice, Inbred C57BLMice, KnockoutPhosphoproteinsPhosphorylationRetinaRetinal DegenerationRetinal Rod Photoreceptor CellsAdaptor Proteins, Signal TransducingAipl1 protein, mouseCyclic GMPCyclic Nucleotide Phosphodiesterases, Type 6Eye ProteinsPhosphoproteinsAIPL1cGMPMetabolismPhosphoproteomicsProteomicsRetinal degeneration

Identifiers

PMID29721955
PMCPMC6005689
OpenAlexW2801859853

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.