Evidence map›Paper›PMID 29720681›Full record

ArticleScientific reports2018

The nanos1 gene was duplicated in early Vertebrates and the two paralogs show different gonadal expression profiles in a shark.

Laura Gribouval, Pascal Sourdaine, Jean-Jacques Lareyre, Johanna Bellaiche, Florence Le Gac, Sylvie Mazan, Cécile Guiardiere, Pierrïck Auvray, Aude Gautier

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Characterization ofAnimals : an open access journal from MDPI · 2022
    Article
  2. Emerging Roles of NANOS RNA-Binding Proteins in Cancer.International journal of molecular sciences · 2022
    Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Laura GribouvalNormandie University, UNICAEN, Sorbonne Universités, MNHN, UPMC University Paris 06, UA, CNRS, IRD, Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), CS14032, 14032 CAEN, Cedex 5, France.
Pascal SourdaineNormandie University, UNICAEN, Sorbonne Universités, MNHN, UPMC University Paris 06, UA, CNRS, IRD, Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), CS14032, 14032 CAEN, Cedex 5, France.
Jean-Jacques LareyreINRA UPR1037, Laboratory of Fish Physiology and Genomics, BIOSIT, Ouest-Genopole, Campus de Beaulieu, 35042, Rennes, France.
Johanna BellaicheINRA UPR1037, Laboratory of Fish Physiology and Genomics, BIOSIT, Ouest-Genopole, Campus de Beaulieu, 35042, Rennes, France.
Florence Le GacINRA UPR1037, Laboratory of Fish Physiology and Genomics, BIOSIT, Ouest-Genopole, Campus de Beaulieu, 35042, Rennes, France.
Sylvie MazanCNRS-UPMC-Sorbonne Universités, UMR 7232, Observatoire océanologique, 66650, Banyuls sur mer, France.
Cécile GuiardiereKELIA, Parc Technopolitain Atalante Saint Malo, 35400, Saint Malo, France.
Pierrïck AuvrayKELIA, Parc Technopolitain Atalante Saint Malo, 35400, Saint Malo, France.
Aude GautierNormandie University, UNICAEN, Sorbonne Universités, MNHN, UPMC University Paris 06, UA, CNRS, IRD, Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), CS14032, 14032 CAEN, Cedex 5, France. aude.gautier@unicaen.fr.
Centre National de la Recherche Scientifique · FRGenopole (France) · FRCentre Hospitalier de Saint-Malo · FRBiologie des Organismes et Écosystèmes Aquatiques · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nanos are RNA-binding proteins playing crucial roles in germ cell development and maintenance. Based on phylogenetic and synteny analyses, this study reveals that nanos1 gene has undergone multiple duplications and gene copies losses in Vertebrates. Chondrichthyan species display two nanos1 genes (named nanos1A/1B), which were both retrieved in some Osteichthyes at basal positions in Sarcopterygii and Actinopterygii lineages. In contrast, Teleosts have lost nanos1A but duplicated nanos1B leading to the emergence of two ohnologs (nanos1Ba/1Bb), whereas Tetrapods have lost nanos1B gene. The two successive nanos gene duplications may result from the second and third whole genome duplication events at the basis of Vertebrates and Teleosts respectively. The expression profiles of nanos1A and nanos1B paralogs were characterized in the dogfish, Scyliorhinus canicula. Nanos1A was strongly expressed in brain and also localized in all germ cell types in the polarized testis. In contrast, nanos1B was detected in testis with the highest expression in the germinative zone. In addition, Nanos1B protein was predominantly located in the nuclei of male germinal cells. In the ovary, both paralogs were detected in germinal and somatic cells. Our study opens new perspectives concerning the complex evolution of nanos1 paralogs and their potential distinct roles in Vertebrates gonads.

Indexed as

Gene DuplicationAnimalsEvolution, MolecularGene Expression ProfilingGene Expression RegulationGonadsImmunohistochemistryOocytesOrgan SpecificityPhylogenyRNA-Binding ProteinsRNA, MessengerSharksSyntenyTranscriptomeVertebratesRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID29720681
PMCPMC5932020
OpenAlexW2802735275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.