Evidence map›Paper›PMID 29720527›Full record

ArticlemSphere

Improved Subtyping of Staphylococcus aureus Clonal Complex 8 Strains Based on Whole-Genome Phylogenetic Analysis.

Jolene R Bowers, Elizabeth M Driebe, Valerie Albrecht, Linda K McDougal, Mitchell Granade, Chandler C Roe, Darrin Lemmer, J Kamile Rasheed, David M Engelthaler, Paul Keim and 1 more

Abstract read
In one paragraph

Article in mSphere. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Dynamic Networks of Methicillin-ResistantOpen forum infectious diseases · 2025
    Article
  7. Article
  8. Genetic and Phenotypic Changes Related to the Development ofAntibiotics (Basel, Switzerland) · 2024
    Article
  9. Article
  10. SaLTy: a novelMicrobial genomics · 2024
    Article
  11. Article
  12. Review
  13. bioRxiv : the preprint server for biology · 2023
    Article
  14. Genomic epidemiology ofMicrobial genomics · 2023
    Observational
  15. Article
  16. Article
  17. Article
  18. Article
  19. Performance Evaluation of the IR BiotyperAntibiotics (Basel, Switzerland) · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jolene R BowersTranslational Genomics Research Institute, Flagstaff, Arizona, USA jbowers@tgen.org.
Elizabeth M DriebeTranslational Genomics Research Institute, Flagstaff, Arizona, USA.
Valerie AlbrechtDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Linda K McDougalDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Mitchell GranadeDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Chandler C RoeTranslational Genomics Research Institute, Flagstaff, Arizona, USA.
Darrin LemmerTranslational Genomics Research Institute, Flagstaff, Arizona, USA.
J Kamile RasheedDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
David M EngelthalerTranslational Genomics Research Institute, Flagstaff, Arizona, USA.ORCID 0000-0001-5945-059X
Paul KeimTranslational Genomics Research Institute, Flagstaff, Arizona, USA.ORCID 0000-0003-0089-5820
Brandi M LimbagoDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

Funding

Molecular Antibiotic Resistance Arrays for clinical microbiology laboratoriesR01AI090782 · NIAID · TRANSLATIONAL GENOMICS RESEARCH INST · PI KEIM, PAUL STEPHEN · 2010 to 2014
$4.6M
NIAID NIH HHS R01 AI090782
6 · The paper itself

Abstract

Strains of

Indexed as

PhylogenyWhole Genome SequencingEvolution, MolecularHumansMolecular EpidemiologyMolecular TypingStaphylococcal InfectionsStaphylococcus aureusassay developmentCC8MRSAMSSAphylogenyStaphylococcus aureusstrain typingwhole genome

Identifiers

PMID29720527
PMCPMC5932376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.