Evidence map›Paper›PMID 29720524›Full record

ArticlemSphere

High Rate of Infection by Only Oncogenic Human Papillomavirus in Amerindians.

Daniela Vargas-Robles, Magda Magris, Natalia Morales, Maurits N C de Koning, Iveth Rodríguez, Tahidid Nieves, Filipa Godoy-Vitorino, Gloria I Sánchez, Luis David Alcaraz, Larry J Forney and 4 more

Open access · goldAbstract read
In one paragraph

Article in mSphere. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 7 countries.

Daniela Vargas-RoblesDepartment of Biology, University of Puerto Rico, San Juan, Puerto Rico, USA.
Magda MagrisServicio Autónomo Centro Amazónico de Investigación y Control de Enfermedades Tropicales Simón Bolívar, MPPS, Puerto Ayacucho, Venezuela.
Natalia MoralesServicio Autónomo Centro Amazónico de Investigación y Control de Enfermedades Tropicales Simón Bolívar, MPPS, Puerto Ayacucho, Venezuela.
Maurits N C de KoningDDL Diagnostic Laboratory, Rijswijk, The Netherlands.
Iveth RodríguezMinisterio del Poder Popular para la Salud, Caracas, Venezuela.
Tahidid NievesServicio Autónomo Centro Amazónico de Investigación y Control de Enfermedades Tropicales Simón Bolívar, MPPS, Puerto Ayacucho, Venezuela.
Filipa Godoy-VitorinoDepartment of Natural Sciences, Inter American University of Puerto Rico, San Juan, Puerto Rico, USA.
Gloria I SánchezGrupo Infección y Cáncer, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia.
Luis David AlcarazDepartamento de Biología Celular, Facultad de Ciencias, Universidad Nacional Autónoma de México, México City, Mexico.ORCID 0000-0003-3284-0605
Larry J ForneyDepartment of Biological Sciences and Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, Idaho, USA.ORCID 0000-0003-2448-1219
María-Eglée PérezDepartment of Mathematics, University of Puerto Rico, San Juan, Puerto Rico, USA.
Luis García-BriceñoAnthropology Department, London School of Economics, London, England.
Leen-Jan van DoornDDL Diagnostic Laboratory, Rijswijk, The Netherlands.
María Gloria Domínguez-BelloDepartment of Medicine, New York University School of Medicine, New York, New York, USA mg.dominguez-bello@rutgers.edu.
DDL Diagnostic Laboratory · NLUniversity of Puerto Rico System · PRInterAmerican University of Puerto Rico · PRLondon School of Economics and Political Science · GBMinisterio del Poder Popular para la Educación Universitaria, Ciencia y Tecnología · VENew York University · USUniversidad de Antioquia · COUniversidad Nacional Autónoma de México · MXUniversity of Idaho · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human papillomavirus (HPV), an etiological agent of cervical cancer (CC), has infected humans since ancient times. Amerindians are the furthest migrants out of Africa, and they reached the Americas more than 14,000 years ago. Some groups still remain isolated, and some migrate to towns, forming a gradient spanning urbanization. We hypothesized that, by virtue of their history, lifestyle, and isolation from the global society, remote Amerindian women have lower HPV diversity than do urban women (Amerindian or mestizo). Here we determined the diversity of the 25 most relevant cervical HPV types in 82 Amerindians spanning urbanization (low, medium, and high, consistent with the exposure to urban lifestyles of the town of Puerto Ayacucho in the Venezuelan Amazonas State), and in 29 urban mestizos from the town. Cervical, anal, oral, and introitus samples were taken, and HPVs were typed using reverse DNA hybridization. A total of 23 HPV types were detected, including 11 oncogenic or high-risk types, most associated with CC. Cervical HPV prevalence was 75%, with no differences by group, but Amerindians from low and medium urbanization level had significantly lower HPV diversity than mestizos did. In Amerindians, but not in mestizos, infections by only high-risk HPVs were higher than coinfections or by exclusively low-risk HPVs. Cervical abnormalities only were observed in Amerindians (9/82), consistent with their high HPV infection. The lower cervical HPV diversity in more isolated Amerindians is consistent with their lower exposure to the global pool, and transculturation to urban lifestyles could have implications on HPV ecology, infection, and virulence.

Indexed as

Genetic VariationGenotypeAdolescentAdultAmerican Indian or Alaska NativeCoinfectionFemaleGenotyping TechniquesHumansMiddle AgedNucleic Acid HybridizationPapillomaviridaePapillomavirus InfectionsPrevalenceVenezuelaYoung Adultdiversityhuman papillomaviruslifestyleoncogenic virusurbanization

Identifiers

PMID29720524
PMCPMC5932372
OpenAlexW2799526967

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.