Evidence map›Paper›PMID 29720519›Full record

ArticleJournal of virology2018

Glycan Binding Specificity and Mechanism of Human and Porcine P[6]/P[19] Rotavirus VP8*s.

Xiaoman Sun, Dandi Li, Jianxun Qi, Wengang Chai, Luyao Wang, Lihong Wang, Ruchao Peng, Han Wang, Qing Zhang, Lili Pang and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  8. Article
  9. Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Article
  11. Structural Basis of Glycan Recognition of Rotavirus.Frontiers in molecular biosciences · 2021
    Review
  12. Review
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Xiaoman Sun *Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Dandi Li *Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Jianxun Qi *CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing, China.
Wengang ChaiGlycosciences Laboratory, Department of Medicine, Imperial College London, London, United Kingdom.
Luyao WangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Lihong WangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Ruchao PengCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing, China.
Han WangCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing, China.
Qing ZhangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Lili PangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Xiangyu KongKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Hong WangCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing, China.
Miao JinKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
George F GaoCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing, China.
Zhaojun DuanKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China zhaojund@126.com.
Chinese Center For Disease Control and Prevention · CNChinese Academy of Sciences · CNNational Health and Family Planning Commission · CNInstitute of Microbiology · CNNational Institute for Viral Disease Control and Prevention · CNImperial College London · GB

Funding

Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Protein-Glycan Interaction Resource of the CFGR24GM098791 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, PAULSON, JAMES C · 2011 to 2013
$2.6M
NIGMS NIH HHS P41 GM103694NIGMS NIH HHS R24 GM098791
6 · The paper itself

Abstract

Rotaviruses (RVs), which cause severe gastroenteritis in infants and children, recognize glycan ligands in a genotype-dependent manner via the distal VP8* head of the spike protein VP4. However, the glycan binding mechanisms remain elusive for the P[II] genogroup RVs, including the widely prevalent human RVs (P[8], P[4], and P[6]) and a rare P[19] RV. In this study, we characterized the glycan binding specificities of human and porcine P[6]/P[19] RV VP8*s and found that the P[II] genogroup RV VP8*s could commonly interact with mucin core 2, which may play an important role in RV evolution and cross-species transmission. We determined the first P[6] VP8* structure, as well as the complex structures of human P[19] VP8*, with core 2 and lacto-

Indexed as

Amino Acid SequenceAnimalsBinding SitesCrystallography, X-RayHost SpecificityHumansMutationPhylogenyPolysaccharidesProtein ConformationRNA-Binding ProteinsRotavirusRotavirus InfectionsSequence HomologySubstrate SpecificitySwineNS35 protein, rotavirusPolysaccharidesRNA-Binding ProteinsViral Nonstructural Proteinsglycan binding specificitylacto-N-tetraose (LNT)mucin core 2P[19] rotavirusP[6] rotavirusVP8* structure

Identifiers

PMID29720519
PMCPMC6026740
OpenAlexW2799511375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.