Evidence map›Paper›PMID 29720400›Full record

ArticleThe Journal of biological chemistry2018

Interferon regulatory factor 1 and a variant of heterogeneous nuclear ribonucleoprotein L coordinately silence the gene for adhesion protein CEACAM1.

Kenneth J Dery, Craig Silver, Lu Yang, John E Shively

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Mechanism and function of CEACAM1 splice isoforms.European journal of clinical investigation · 2024
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Kenneth J DeryFrom the Department of Molecular Immunology, Beckman Research Institute of the City of Hope, Duarte, California 91010.
Craig SilverDepartment of Biological Sciences, California State Polytechnic University, Pomona, California 91768, and.
Lu YangThe Integrative Genomics and Bioinformatics Core, Beckman Research Institute of the City of Hope, Duarte, California 91010.
John E ShivelyFrom the Department of Molecular Immunology, Beckman Research Institute of the City of Hope, Duarte, California 91010, jshively@coh.org.ORCID 0000-0002-7763-770X
City Of Hope National Medical Center · USCalifornia State Polytechnic University · USCity of Hope · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
NCI NIH HHS P30 CA033572
6 · The paper itself

Abstract

The adhesion protein carcinoembryonic antigen-related cell adhesion molecule 1 (CEACAM1) is widely expressed in epithelial cells as a short cytoplasmic isoform (S-iso) and in leukocytes as a long cytoplasmic isoform (L-iso) and is frequently silenced in cancer by unknown mechanisms. Previously, we reported that interferon response factor 1 (IRF1) biases alternative splicing (AS) to include the variable exon 7 (E7) in CEACAM1, generating long cytoplasmic isoforms. We now show that IRF1 and a variant of heterogeneous nuclear ribonucleoprotein L (Lv1) coordinately silence the

Indexed as

Down-RegulationAlternative SplicingAntigens, CDCell Adhesion MoleculesCell Line, TumorGene Expression Regulation, NeoplasticHeLa CellsHeterogeneous-Nuclear Ribonucleoprotein LHumansInterferon Regulatory Factor-1NeoplasmsPromoter Regions, GeneticProtein BiosynthesisProtein IsoformsTranscriptional ActivationAntigens, CDCD66 antigensCell Adhesion MoleculesHeterogeneous-Nuclear Ribonucleoprotein LInterferon Regulatory Factor-1IRF1 protein, humanProtein Isoformsalternative splicingCEACAM1chromatin remodelinghnRNP LIFN-gammaIRF1RNAtranscriptiontranslation regulation

Identifiers

PMID29720400
PMCPMC6005424
OpenAlexW2801212442

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.