ArticleBMC genomics2018
Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress.
Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.
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Who cites it
32 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.
- Blossoms amid drought: a bibliometric mapping of research on drought stress in ornamental plants (1995-2025).Frontiers in plant science · 2025Pooled it
- Genome-wide identification of the CmPLATZ gene family and its role in cold acclimation and overwintering in Chrysanthemum morifolium.BMC plant biology · 2026Article
- Integrative transcriptomic and metabolomic analysis elucidates the vital pathways underlying the differences in salt stress responses between two chickpea (Cicer arietinum L.) varieties.BMC plant biology · 2025Article
- Integrated transcriptomics and proteomics revealed that exogenous spermidine modulated signal transduction and carbohydrate metabolic pathways to enhance heat tolerance of lettuce.BMC plant biology · 2025Article
- Physiological and transcriptomic analysis of tomato in response to sub-optimal temperature stress.Plant signaling & behavior · 2024Article
- Muti-omics revealed the mechanisms of MT-conferred tolerance of Elymus nutans Griseb. to low temperature at XiZang.BMC plant biology · 2024Article
- Genome-Wide Identification of the WRKY Gene Family in Four Cotton Varieties and the Positive Role ofPlants (Basel, Switzerland) · 2024Article
- Physiochemical Responses and Ecological Adaptations of Peach to Low-Temperature Stress: Assessing the Cold Resistance of Local Peach Varieties from Gansu, China.Plants (Basel, Switzerland) · 2023Article
- Phytochemicals, therapeutic benefits and applications ofHeliyon · 2023Review
- Detection of Transcription Factors Related to Axillary Bud Development after Exposure to Cold Conditions in HexaploidPlants (Basel, Switzerland) · 2023Article
- Transcriptome Analysis Reveals Brassinolide Signaling Pathway Control of Foxtail Millet Seedling Starch and Sucrose Metabolism under Freezing Stress, with Implications for Growth and Development.International journal of molecular sciences · 2023Article
- Article
- Effect of shading on physiological attributes and comparative transcriptome analysis ofFrontiers in plant science · 2023Article
- Unveiling Molecular Mechanisms of Nitric Oxide-Induced Low-Temperature Tolerance in Cucumber by Transcriptome Profiling.International journal of molecular sciences · 2022Article
- DgbZIP3 interacts with DgbZIP2 to increase the expression ofHorticulture research · 2022Article
- Overexpression of anFrontiers in plant science · 2022Article
- Transcriptome analysis of differentially expressed genes in chrysanthemumPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- WRKY transcription factors and plant defense responses: latest discoveries and future prospects.Plant cell reports · 2021Review
- Effects of soaking seeds in exogenous vitamins on active oxygen metabolism and seedling growth under low-temperature stress.Saudi journal of biological sciences · 2021Article
- Proteome-wide and lysine crotonylation profiling reveals the importance of crotonylation in chrysanthemum (Dendranthema grandiforum) under low-temperature.BMC genomics · 2021Article
Corrections and comments
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Authors and funding
10 authors at 1 institution in 1 country.
Funding
Abstract
backgroundChrysanthemum is one kind of ornamental plant well-known and widely used in the world. However, its quality and production were severely affected by low temperature conditions in winter and early spring periods. Therefore, we used the RNA-Seq platform to perform a de novo transcriptome assembly to analyze chrysanthemum (Dendranthema grandiflorum) transcription response to low temperature.
resultsUsing Illumina sequencing technology, a total of 86,444,237 high-quality clean reads and 93,837 unigenes were generated from four libraries: T01, controls; T02, 4 °C cold acclimation (CA) for 24 h; T03, - 4 °C freezing treatments for 4 h with prior CA; and T04, - 4 °C freezing treatments for 4 h without prior CA. In total, 7583 differentially expressed genes (DEGs) of 36,462 annotated unigenes were identified. We performed GO and KEGG pathway enrichment analyses, and excavated a group of important cold-responsive genes related to low temperature sensing and signal transduction, membrane lipid stability, reactive oxygen species (ROS) scavenging and osmoregulation. These genes encode many key proteins in plant biological processes, such as protein kinases, transcription factors, fatty acid desaturase, lipid-transfer proteins, antifreeze proteins, antioxidase and soluble sugars synthetases. We also verified expression levels of 10 DEGs using quantitative real-time polymerase chain reaction (qRT-PCR). In addition, we performed the determination of physiological indicators of chrysanthemum treated at low temperature, and the results were basically consistent with molecular sequencing results.
conclusionIn summary, our study presents a genome-wide transcript profile of Dendranthema grandiflorum var. jinba and provides insights into the molecular mechanisms of D. grandiflorum in response to low temperature. These data contributes to our deeper relevant researches on cold tolerance and further exploring new candidate genes for chilling-tolerance and freezing-tolerance chrysanthemum molecular breeding.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.