Evidence map›Paper›PMID 29720087›Full record

ArticleBMC genomics2018

The dehydration stress of couch grass is associated with its lipid metabolism, the induction of transporters and the re-programming of development coordinated by ABA.

Anna Janská, Pavel Svoboda, Vojtěch Spiwok, Ladislav Kučera, Jaroslava Ovesná

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Conferring of Drought and Heat Stress Tolerance in Wheat (Nanomaterials (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Anna JanskáFaculty of Science, Charles University, Prague, Czech Republic.
Pavel SvobodaDivision of Crop Genetics and Breeding, Crop Research Institute, Prague, Czech Republic. pavel.svoboda@vurv.cz.
Vojtěch SpiwokFactulty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Ladislav KučeraDivision of Crop Genetics and Breeding, Crop Research Institute, Prague, Czech Republic.
Jaroslava OvesnáDivision of Crop Genetics and Breeding, Crop Research Institute, Prague, Czech Republic.
Crop Research Institute · CZCharles University · CZUniversity of Chemistry and Technology, Prague · CZ

Funding

Czech Ministry of Agriculture RO0417Czech ministry of Education Youth and Sports LO1417Czech National Agency for Agricultural Research QH81287 and QJ1310055Specific University Research MSMT 20/2015
6 · The paper itself

Abstract

backgroundThe wild relatives of crop species represent a potentially valuable source of novel genetic variation, particularly in the context of improving the crop's level of tolerance to abiotic stress. The mechanistic basis of these tolerances remains largely unexplored. Here, the focus was to characterize the transcriptomic response of the nodes (meristematic tissue) of couch grass (a relative of barley) to dehydration stress, and to compare it to that of the barley crown formed by both a drought tolerant and a drought sensitive barley cultivar.

resultsMany of the genes up-regulated in the nodes by the stress were homologs of genes known to be mediated by abscisic acid during the response to drought, or were linked to either development or lipid metabolism. Transporters also featured prominently, as did genes acting on root architecture. The resilience of the couch grass node arise from both their capacity to develop an altered, more effective root architecture, but also from their formation of a lipid barrier on their outer surface and their ability to modify both their lipid metabolism and transporter activity when challenged by dehydration stress.

conclusionsOur analysis revealed the nature of dehydration stress response in couch grass. We suggested the tolerance is associated with lipid metabolism, the induction of transporters and the re-programming of development coordinated by ABA. We also proved the applicability of barley microarray for couch grass stress-response analysis.

Indexed as

DroughtsAbscisic AcidElectrolytesGene Expression ProfilingLipid MetabolismMembrane Transport ProteinsPoaceaeStress, PhysiologicalWaterAbscisic AcidElectrolytesMembrane Transport ProteinsWaterBarleyCouch grassCrownDehydration stressDroughtMicroarrayRhizome

Identifiers

PMID29720087
PMCPMC5930771
OpenAlexW2805788075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.