Evidence map›Paper›PMID 29720086›Full record

ArticleBMC genomics2018

CLICK: one-step generation of conditional knockout mice.

Yoshiki Miyasaka, Yoshihiro Uno, Kazuto Yoshimi, Yayoi Kunihiro, Takuji Yoshimura, Tomohiro Tanaka, Harumi Ishikubo, Yuichi Hiraoka, Norihiko Takemoto, Takao Tanaka and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 100 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Yoshiki MiyasakaInstitute of Experimental Animal Sciences, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Yoshihiro UnoInstitute of Experimental Animal Sciences, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Kazuto YoshimiGenome Editing Research and Development (R&D) Center, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Yayoi KunihiroInstitute of Experimental Animal Sciences, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Takuji YoshimuraInstitute of Experimental Animal Sciences, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Tomohiro TanakaMedical Innovation Center, Graduate School of Medicine, Kyoto University, Kyoto, 606-8507, Japan.
Harumi IshikuboLaboratory of Recombinant Animals, Medical Research Institute (MRI), Tokyo Medical and Dental University (TMDU), Chiyoda, Tokyo, 101-0062, Japan.
Yuichi HiraokaLaboratory of Recombinant Animals, Medical Research Institute (MRI), Tokyo Medical and Dental University (TMDU), Chiyoda, Tokyo, 101-0062, Japan.
Norihiko TakemotoDepartment of Otorhinolaryngology-Head and Neck Surgery, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Takao TanakaKAC Co., Ltd., Kyoto, 604-8423, Japan.
Yoshihiro OoguchiKAC Co., Ltd., Kyoto, 604-8423, Japan.
Paul SkehelCentre for Integrative Physiology, University of Edinburgh, Edinburgh, EH8 9XD, UK.
Tomomi AidaLaboratory of Recombinant Animals, Medical Research Institute (MRI), Tokyo Medical and Dental University (TMDU), Chiyoda, Tokyo, 101-0062, Japan.
Junji TakedaDepartment of Genome Biology, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan.
Tomoji MashimoInstitute of Experimental Animal Sciences, Graduate School of Medicine, Osaka University, Osaka, 565-0871, Japan. mashimo@iexas.med.osaka-u.ac.jp.ORCID http://orcid.org/0000-0001-7543-7301
The University of Osaka · JPTokyo Medical and Dental University · JPKyoto University · JPNational Institute of Genetics · JPUniversity of Edinburgh · GB

Funding

Japan Society for the Promotion of Science 26290033Japan Society for the Promotion of Science 26830131
6 · The paper itself

Abstract

backgroundCRISPR/Cas9 enables the targeting of genes in zygotes; however, efficient approaches to create loxP-flanked (floxed) alleles remain elusive.

resultsHere, we show that the electroporation of Cas9, two gRNAs, and long single-stranded DNA (lssDNA) into zygotes, termed CLICK (CRISPR with lssDNA inducing conditional knockout alleles), enables the quick generation of floxed alleles in mice and rats.

conclusionsThe high efficiency of CLICK provides homozygous knock-ins in oocytes carrying tissue-specific Cre, which allows the one-step generation of conditional knockouts in founder (F0) mice.

Indexed as

AllelesAnimalsBase SequenceCRISPR-Cas SystemsGenetic EngineeringInjectionsMiceMice, KnockoutZygoteCLICKCre-loxP systemCRISPR/Cas9Long single-stranded DNAZygote electroporation

Identifiers

PMID29720086
PMCPMC5930688
OpenAlexW2804655893

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.