Evidence map›Paper›PMID 29718905›Full record

ArticlePLoS computational biology2018

Identification of animal behavioral strategies by inverse reinforcement learning.

Shoichiro Yamaguchi, Honda Naoki, Muneki Ikeda, Yuki Tsukada, Shunji Nakano, Ikue Mori, Shin Ishii

Abstract read
In one paragraph

Article in PLoS computational biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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  8. Context-dependent operation of neural circuits underlies a navigation behavior inProceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shoichiro YamaguchiIntegrated Systems Biology Laboratory, Graduate School of Informatics, Kyoto University, Sakyo, Kyoto, Japan.
Honda NaokiLaboratory of Theoretical Biology, Graduate School of Biostudies, Kyoto University, Yoshidakonoecho, Sakyo, Kyoto, Japan.ORCID 0000-0001-6816-9126
Muneki IkedaGroup of Molecular Neurobiology, Graduate School of Science, Nagoya University, Furoucho, Chikusa, Nagoya, Aichi, Japan.
Yuki TsukadaGroup of Molecular Neurobiology, Graduate School of Science, Nagoya University, Furoucho, Chikusa, Nagoya, Aichi, Japan.
Shunji NakanoGroup of Molecular Neurobiology, Graduate School of Science, Nagoya University, Furoucho, Chikusa, Nagoya, Aichi, Japan.
Ikue MoriGroup of Molecular Neurobiology, Graduate School of Science, Nagoya University, Furoucho, Chikusa, Nagoya, Aichi, Japan.
Shin IshiiIntegrated Systems Biology Laboratory, Graduate School of Informatics, Kyoto University, Sakyo, Kyoto, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Animals are able to reach a desired state in an environment by controlling various behavioral patterns. Identification of the behavioral strategy used for this control is important for understanding animals' decision-making and is fundamental to dissect information processing done by the nervous system. However, methods for quantifying such behavioral strategies have not been fully established. In this study, we developed an inverse reinforcement-learning (IRL) framework to identify an animal's behavioral strategy from behavioral time-series data. We applied this framework to C. elegans thermotactic behavior; after cultivation at a constant temperature with or without food, fed worms prefer, while starved worms avoid the cultivation temperature on a thermal gradient. Our IRL approach revealed that the fed worms used both the absolute temperature and its temporal derivative and that their behavior involved two strategies: directed migration (DM) and isothermal migration (IM). With DM, worms efficiently reached specific temperatures, which explains their thermotactic behavior when fed. With IM, worms moved along a constant temperature, which reflects isothermal tracking, well-observed in previous studies. In contrast to fed animals, starved worms escaped the cultivation temperature using only the absolute, but not the temporal derivative of temperature. We also investigated the neural basis underlying these strategies, by applying our method to thermosensory neuron-deficient worms. Thus, our IRL-based approach is useful in identifying animal strategies from behavioral time-series data and could be applied to a wide range of behavioral studies, including decision-making, in other organisms.

Indexed as

Reinforcement, PsychologyAnimalsBehavior, AnimalCaenorhabditis elegansComputational BiologyDecision MakingLearningTaxis Response

Identifiers

PMID29718905
PMCPMC5951592

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.