Evidence map›Paper›PMID 29717540›Full record

ArticleHuman brain mapping2018

BrainMap VBM: An environment for structural meta-analysis.

Thomas J Vanasse, P Mickle Fox, Daniel S Barron, Michaela Robertson, Simon B Eickhoff, Jack L Lancaster, Peter T Fox

Abstract read
In one paragraph

Article in Human brain mapping, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 21 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 21 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 21 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. A co-alteration parceling of the cingulate cortex.Brain structure & function · 2022
    Pooled it
  12. Pooled it
  13. Pooled it
  14. Pooled it
  15. Pooled it
  16. Pooled it
  17. Pooled it
  18. Pooled it
  19. Pooled it
  20. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thomas J VanasseResearch Imaging Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas.ORCID 0000-0003-4672-0049
P Mickle FoxResearch Imaging Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas.ORCID 0000-0002-4997-0003
Daniel S BarronDepartment of Psychiatry, Yale University School of Medicine, New Haven, Connecticut.ORCID 0000-0002-0686-6337
Michaela RobertsonResearch Imaging Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas.ORCID 0000-0002-6812-6991
Simon B EickhoffInstitute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Centre Jülich, Jülich, Germany.ORCID 0000-0001-6363-2759
Jack L LancasterResearch Imaging Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Peter T FoxResearch Imaging Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas.ORCID 0000-0002-0465-2028

Funding

Meta-anaylsis in human brain mappingR01MH074457 · NIMH · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FOX, PETER THORNTON · 2006 to 2024
$10.5M
Clinical Neuroscience Research Training Program in PsychiatryT32MH019961 · NIMH · YALE UNIVERSITY · PI Christopher John Pittenger · 1996 to 2026
$5.9M
Mango: literature-informed, 3-D visualization of human brain imagesR01EB015314 · NIBIB · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LANCASTER, JACK L. · 2013 to 2015
$987k
Development of a Cognitive Paradigm Ontology: BrainMap and BIRN IntergrationR01MH084812 · NIMH · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FOX, PETER THORNTON, TURNER, JESS · 2009 to 2011
$869k
Neuroimaging in the Oklahoma Family Health Patterns ProjectR01AA019691 · NIAAA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI LOVALLO, WILLIAM R · 2011 to 2013
$555k
Meta-analysis in human brain mappingR56MH074457 · NIMH · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FOX, PETER THORNTON · 2020 to 2020
$543k
A Baboon Model of TMS/PET as a Vehicle for Rational Development of TMS TreatmentsR21NS062254 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FOX, PETER THORNTON · 2009 to 2010
$407k
Quantification of Thalamic Atrophy and Connectivity in Medial Temporal Lobe EpileF31NS083160 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BARRON, DANIEL S. · 2013 to 2014
$33k
CAP - Consortium to Alleviate PTSD - STVHCS Neuroimaging CoreI01CX001137 · VA · SOUTH TEXAS VETERANS HEALTH CARE SYSTEM · PI FOX, PETER THORNTON · 2014 to 2015
–
CSRD VA I01 CX001137NIAAA NIH HHS R01 AA019691NIBIB NIH HHS R01 EB015314NIMH NIH HHS R01 MH074457NIMH NIH HHS R01 MH084812NIMH NIH HHS R56 MH074457NIMH NIH HHS T32 MH019961NINDS NIH HHS F31 NS083160NINDS NIH HHS R21 NS062254
6 · The paper itself

Abstract

The BrainMap database is a community resource that curates peer-reviewed, coordinate-based human neuroimaging literature. By pairing the results of neuroimaging studies with their relevant meta-data, BrainMap facilitates coordinate-based meta-analysis (CBMA) of the neuroimaging literature en masse or at the level of experimental paradigm, clinical disease, or anatomic location. Initially dedicated to the functional, task-activation literature, BrainMap is now expanding to include voxel-based morphometry (VBM) studies in a separate sector, titled: BrainMap VBM. VBM is a whole-brain, voxel-wise method that measures significant structural differences between or within groups which are reported as standardized, peak x-y-z coordinates. Here we describe BrainMap VBM, including the meta-data structure, current data volume, and automated reverse inference functions (region-to-disease profile) of this new community resource. CBMA offers a robust methodology for retaining true-positive and excluding false-positive findings across studies in the VBM literature. As with BrainMap's functional database, BrainMap VBM may be synthesized en masse or at the level of clinical disease or anatomic location. As a use-case scenario for BrainMap VBM, we illustrate a trans-diagnostic data-mining procedure wherein we explore the underlying network structure of 2,002 experiments representing over 53,000 subjects through independent components analysis (ICA). To reduce data-redundancy effects inherent to any database, we demonstrate two data-filtering approaches that proved helpful to ICA. Finally, we apply hierarchical clustering analysis (HCA) to measure network- and disease-specificity. This procedure distinguished psychiatric from neurological diseases. We invite the neuroscientific community to further exploit BrainMap VBM with other modeling approaches.

Indexed as

Databases, FactualMeta-Analysis as TopicNeuroimagingBrainBrain MappingData MiningHumansMental DisordersNervous System DiseasesSoftwareatrophydata-miningindependent components analysisnetworkspattern analysisstructural covariancestructural magnetic resonance imagingtransdiagnosticvoxel-based morphometry

Identifiers

PMID29717540
PMCPMC6866579

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.