Evidence map›Paper›PMID 29717219›Full record

ArticleScientific reports2018

Proteomic differences between focal and diffuse traumatic brain injury in human brain tissue.

Sami Abu Hamdeh, Ganna Shevchenko, Jia Mi, Sravani Musunuri, Jonas Bergquist, Niklas Marklund

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
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  16. Analysis of human brain tissue derived from DBS surgery.Translational neurodegeneration · 2022
    Article
  17. Article
  18. Review
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Sami Abu HamdehDepartment of Neuroscience, Neurosurgery, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-6173-8357
Ganna ShevchenkoAnalytical Chemistry, Department of Chemistry-BMC, Uppsala University, Uppsala, Sweden.
Jia MiAnalytical Chemistry, Department of Chemistry-BMC, Uppsala University, Uppsala, Sweden.
Sravani MusunuriAnalytical Chemistry, Department of Chemistry-BMC, Uppsala University, Uppsala, Sweden.
Jonas BergquistAnalytical Chemistry, Department of Chemistry-BMC, Uppsala University, Uppsala, Sweden.
Niklas MarklundDepartment of Neuroscience, Neurosurgery, Uppsala University, Uppsala, Sweden. niklas.marklund@neuro.uu.se.ORCID 0000-0002-9797-5626
Uppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The early molecular response to severe traumatic brain injury (TBI) was evaluated using biopsies of structurally normal-appearing cortex, obtained at location for intracranial pressure (ICP) monitoring, from 16 severe TBI patients. Mass spectrometry (MS; label free and stable isotope dimethyl labeling) quantitation proteomics showed a strikingly different molecular pattern in TBI in comparison to cortical biopsies from 11 idiopathic normal pressure hydrocephalus patients. Diffuse TBI showed increased expression of peptides related to neurodegeneration (Tau and Fascin, p < 0.05), reduced expression related to antioxidant defense (Glutathione S-transferase Mu 3, Peroxiredoxin-6, Thioredoxin-dependent peroxide reductase; p < 0.05) and increased expression of potential biomarkers (e.g. Neurogranin, Fatty acid-binding protein, heart p < 0.05) compared to focal TBI. Proteomics of human brain biopsies displayed considerable molecular heterogeneity among the different TBI subtypes with consequences for the pathophysiology and development of targeted treatments for TBI.

Indexed as

AdultAgedBiopsyBrainBrain Injuries, TraumaticCarrier ProteinsCohort StudiesFemaleGene ExpressionGlutathione TransferaseHumansHydrocephalusIntracranial PressureMaleMicrofilament ProteinsMiddle AgedCarrier ProteinsFSCN1 protein, humanGlutathione TransferaseMAPT protein, humanMicrofilament ProteinsNeurograninPeroxiredoxin IIIPeroxiredoxinsProteometau Proteins

Identifiers

PMID29717219
PMCPMC5931620
OpenAlexW2794578540

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.