Evidence map›Paper›PMID 29717152›Full record

ArticleScientific reports2018

Chicken Interferon-induced Protein with Tetratricopeptide Repeats 5 Antagonizes Replication of RNA Viruses.

Diwakar Santhakumar, Mohammed Abdel Mohsen Shahaat Rohaim, Hussein A Hussein, Pippa Hawes, Helena Lage Ferreira, Shahriar Behboudi, Munir Iqbal, Venugopal Nair, Clarice W Arns, Muhammad Munir

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
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  6. Antiviral Effects of Avian Interferon-Stimulated Genes.Animals : an open access journal from MDPI · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Diwakar SanthakumarDivision of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster, LA1 4YG, UK.
Mohammed Abdel Mohsen Shahaat RohaimDivision of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster, LA1 4YG, UK.
Hussein A HusseinDepartment of Virology, Faculty of Veterinary Medicine, Cairo University, Giza, 12211, Egypt.
Pippa HawesThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Helena Lage FerreiraUniversidade de São Paulo, Campus de Pirassununga, São Paulo, Brazil.
Shahriar BehboudiThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Munir IqbalThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Venugopal NairThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Clarice W ArnsInstitute of Biology, University of Campinas, São Paulo, Brazil.
Muhammad MunirDivision of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster, LA1 4YG, UK. muhammad.munir@lancaster.ac.uk.
The Pirbright Institute · GBCairo University · EGUniversidade de São Paulo · BRUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

Biotechnology and Biological Sciences Research Council BB/M008681/1Biotechnology and Biological Sciences Research Council BBS/E/I/00001422Biotechnology and Biological Sciences Research Council BBS/E/I/00001708Biotechnology and Biological Sciences Research Council BBS/E/I/00001852Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007034Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007037Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039
6 · The paper itself

Abstract

The intracellular actions of interferon (IFN)-regulated proteins, including IFN-induced proteins with tetratricopeptide repeats (IFITs), attribute a major component of the protective antiviral host defense. Here we applied genomics approaches to annotate the chicken IFIT locus and currently identified a single IFIT (chIFIT5) gene. The profound transcriptional level of this effector of innate immunity was mapped within its unique cis-acting elements. This highly virus- and IFN-responsive chIFIT5 protein interacted with negative sense viral RNA structures that carried a triphosphate group on its 5' terminus (ppp-RNA). This interaction reduced the replication of RNA viruses in lentivirus-mediated IFIT5-stable chicken fibroblasts whereas CRISPR/Cas9-edited chIFIT5 gene knockout fibroblasts supported the replication of RNA viruses. Finally, we generated mosaic transgenic chicken embryos stably expressing chIFIT5 protein or knocked-down for endogenous chIFIT5 gene. Replication kinetics of RNA viruses in these transgenic chicken embryos demonstrated the antiviral potential of chIFIT5 in ovo. Taken together, these findings propose that IFIT5 specifically antagonize RNA viruses by sequestering viral nucleic acids in chickens, which are unique in innate immune sensing and responses to viruses of both poultry and human health significance.

Indexed as

Immunity, InnateAmino Acid SequenceAnimalsAvian ProteinsChickensCRISPR-Cas SystemsEmbryo, NonmammalianFibroblastsGene Expression RegulationGene Knockout TechniquesHost-Pathogen InteractionsInterferon Regulatory FactorsNewcastle disease virusPrimary Cell CultureSequence AlignmentSequence Homology, Amino AcidAvian ProteinsInterferon Regulatory Factors

Identifiers

PMID29717152
PMCPMC5931624
OpenAlexW2802897459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.