Evidence map›Paper›PMID 29713018›Full record

ArticleNature cell biology2018

A PAX5-OCT4-PRDM1 developmental switch specifies human primordial germ cells.

Fang Fang, Benjamin Angulo, Ninuo Xia, Meena Sukhwani, Zhengyuan Wang, Charles C Carey, Aurélien Mazurie, Jun Cui, Royce Wilkinson, Blake Wiedenheft and 4 more

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Early Gonadal Development and Sex Determination in Mammal.International journal of molecular sciences · 2022
    Review
  10. Transcriptional control of human gametogenesis.Human reproduction update · 2022
    Article
  11. Article
  12. Article
  13. Germline specification from pluripotent stem cells.Stem cell research & therapy · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Chemical Genetics: Manipulating the Germline with Small Molecules.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Fang FangDepartment of Cell Biology and Neurosciences, Montana State University, Bozeman, MT, USA. fangfang0724@gmail.com.ORCID http://orcid.org/0000-0002-5272-302X
Benjamin AnguloDepartment of Cell Biology and Neurosciences, Montana State University, Bozeman, MT, USA.
Ninuo XiaDepartment of Cell Biology and Neurosciences, Montana State University, Bozeman, MT, USA.
Meena SukhwaniDepartment of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh, School of Medicine, Magee Women's Research Institute, Pittsburgh, PA, USA.
Zhengyuan WangGenomic Medicine Division, Hematology Branch, NHLBI/NIH, Rockville, MD, USA.
Charles C CareyDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
Aurélien MazurieDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
Jun CuiDepartment of Cell Biology and Neurosciences, Montana State University, Bozeman, MT, USA.
Royce WilkinsonDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
Blake WiedenheftDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
Naoko IrieWellcome Trust Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge, UK.
M Azim SuraniWellcome Trust Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge, UK.
Kyle E OrwigDepartment of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh, School of Medicine, Magee Women's Research Institute, Pittsburgh, PA, USA.
Renee A Reijo PeraDepartment of Cell Biology and Neurosciences, Montana State University, Bozeman, MT, USA.ORCID http://orcid.org/0000-0002-6487-1329
Montana State University · USUniversity of Cambridge · GBUniversity of Pittsburgh · USNational Heart Lung and Blood Institute · US

Funding

Stanford University Center for Reproductive and Stem Cell biologyP50HD068158 · NICHD · STANFORD UNIVERSITY · PI FULLER, MARGARET T · 2014 to 2015
$3.3M
Dissection of the transcriptional network of human primordial germ cellsR01HD096026 · NICHD · MONTANA STATE UNIVERSITY - BOZEMAN · PI REIJO PERA, RENEE A · 2018 to 2022
$1.6M
Medical Research Council MR/P009948/1NICHD NIH HHS P50 HD068158NICHD NIH HHS R01 HD096026Wellcome Trust 209475/Z/17/Z
6 · The paper itself

Abstract

Dysregulation of genetic pathways during human germ cell development leads to infertility. Here, we analysed bona fide human primordial germ cells (hPGCs) to probe the developmental genetics of human germ cell specification and differentiation. We examined the distribution of OCT4 occupancy in hPGCs relative to human embryonic stem cells (hESCs). We demonstrated that development, from pluripotent stem cells to germ cells, is driven by switching partners with OCT4 from SOX2 to PAX5 and PRDM1. Gain- and loss-of-function studies revealed that PAX5 encodes a critical regulator of hPGC development. Moreover, an epistasis analysis indicated that PAX5 acts upstream of OCT4 and PRDM1. The PAX5-OCT4-PRDM1 proteins form a core transcriptional network that activates germline and represses somatic programmes during human germ cell differentiation. These findings illustrate the power of combined genome editing, cell differentiation and engraftment for probing human developmental genetics that have historically been difficult to study.

Indexed as

Cell DifferentiationAnimalsCell LineGene EditingGene Expression Regulation, DevelopmentalHuman Embryonic Stem CellsHumansMaleMice, NudeOctamer Transcription Factor-3PAX5 Transcription FactorPositive Regulatory Domain I-Binding Factor 1Protein BindingSignal TransductionSOXB1 Transcription FactorsSpermatozoaOctamer Transcription Factor-3PAX5 protein, humanPAX5 Transcription FactorPositive Regulatory Domain I-Binding Factor 1POU5F1 protein, humanPRDM1 protein, humanSOX2 protein, humanSOXB1 Transcription Factors

Identifiers

PMID29713018
PMCPMC5970969
OpenAlexW2799694277

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.