Evidence map›Paper›PMID 29712905›Full record

ArticleNature communications2018

Spatiotemporal manipulation of ciliary glutamylation reveals its roles in intraciliary trafficking and Hedgehog signaling.

Shi-Rong Hong, Cuei-Ling Wang, Yao-Shen Huang, Yu-Chen Chang, Ya-Chu Chang, Ganesh V Pusapati, Chun-Yu Lin, Ning Hsu, Hsiao-Chi Cheng, Yueh-Chen Chiang and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shi-Rong HongInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Cuei-Ling WangInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Yao-Shen HuangInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Yu-Chen ChangDepartment of Life Science, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Ya-Chu ChangInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Ganesh V PusapatiDepartments of Medicine and Biochemistry, Stanford University School of Medicine, Stanford, 94305, CA, USA.
Chun-Yu LinDepartment of Medical Science, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Ning HsuInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Hsiao-Chi ChengDepartment of Medical Science, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Yueh-Chen ChiangInterdisciplinary Program of Science, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Wei-En HuangDepartment of Life Science, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Nathan C ShanerDepartment of Photobiology and Bioimaging, The Scintillon Institute, San Diego, 92121, CA, USA.
Rajat RohatgiDepartments of Medicine and Biochemistry, Stanford University School of Medicine, Stanford, 94305, CA, USA.ORCID http://orcid.org/0000-0001-7609-8858
Takanari InoueDepartment of Cell Biology, Center for Cell Dynamics, School of Medicine, Johns Hopkins University, Baltimore, 21205, MD, USA. jctinoue@jhmi.edu.
Yu-Chun LinInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, 30013, Taiwan. ycl@life.nthu.edu.tw.

Funding

Supplement application for an Olympus automated microscopeR35GM118082 · NIGMS · STANFORD UNIVERSITY · PI RAJAT ROHATGI · 2016 to 2026
$7.6M
Reconstructing Primary CiliaDP2GM105448 · NIGMS · STANFORD UNIVERSITY · PI ROHATGI, RAJAT · 2012 to 2012
$2.4M
Fluorescent proteins for superresolution imagingR01GM109984 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHANER, NATHAN CHRISTOPHER · 2014 to 2018
$1.8M
Flow sensation by kidney cellsR01DK102910 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI INOUE, TAKANARI · 2014 to 2017
$1.6M
NIDDK NIH HHS R01 DK102910NIGMS NIH HHS DP2 GM105448NIGMS NIH HHS R01 GM109984NIGMS NIH HHS R35 GM118082
6 · The paper itself

Abstract

Tubulin post-translational modifications (PTMs) occur spatiotemporally throughout cells and are suggested to be involved in a wide range of cellular activities. However, the complexity and dynamic distribution of tubulin PTMs within cells have hindered the understanding of their physiological roles in specific subcellular compartments. Here, we develop a method to rapidly deplete tubulin glutamylation inside the primary cilia, a microtubule-based sensory organelle protruding on the cell surface, by targeting an engineered deglutamylase to the cilia in minutes. This rapid deglutamylation quickly leads to altered ciliary functions such as kinesin-2-mediated anterograde intraflagellar transport and Hedgehog signaling, along with no apparent crosstalk to other PTMs such as acetylation and detyrosination. Our study offers a feasible approach to spatiotemporally manipulate tubulin PTMs in living cells. Future expansion of the repertoire of actuators that regulate PTMs may facilitate a comprehensive understanding of how diverse tubulin PTMs encode ciliary as well as cellular functions.

Indexed as

Protein Processing, Post-TranslationalAcetylationAnimalsCiliaGenes, ReporterGlutamic AcidGreen Fluorescent ProteinsHedgehog ProteinsKinesinsMiceMicrotubule-Associated ProteinsNIH 3T3 CellsOptical ImagingSignal TransductionTubulinTyrosineCyan Fluorescent ProteinGlutamic AcidGreen Fluorescent ProteinsHedgehog ProteinsKinesinsMicrotubule-Associated ProteinsTubulinTyrosine

Identifiers

PMID29712905
PMCPMC5928066

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.