Evidence map›Paper›PMID 29712876›Full record

ArticleJournal of bacteriology2018

Guanine Limitation Results in CodY-Dependent and -Independent Alteration of Staphylococcus aureus Physiology and Gene Expression.

Alyssa N King, Samiksha A Borkar, David J Samuels, Zachary Batz, Logan L Bulock, Marat R Sadykov, Kenneth W Bayles, Shaun R Brinsmade

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. InJournal of bacteriology · 2026
    Article
  2. Article
  3. InbioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Revealing 29 sets of independently modulated genes inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Noncontiguous operon is a genetic organization for coordinating bacterial gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Alyssa N KingDepartment of Biology, Georgetown University, Washington, DC, USA.
Samiksha A BorkarDepartment of Biology, Georgetown University, Washington, DC, USA.
David J SamuelsDepartment of Biology, Georgetown University, Washington, DC, USA.
Zachary BatzDepartment of Biology, Georgetown University, Washington, DC, USA.
Logan L BulockDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Marat R SadykovDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Kenneth W BaylesDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Shaun R BrinsmadeDepartment of Biology, Georgetown University, Washington, DC, USA shaun.brinsmade@georgetown.edu.ORCID 0000-0002-5381-2817
Georgetown University · USUniversity of Nebraska Medical Center · US

Funding

The S. aureus biofilm lifecycleP01AI083211 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI HANDKE, LUKE D · 2009 to 2023
$32.1M
ISOLATION OF EARLY SPORULATION GENESR01GM042219 · NIGMS · TUFTS UNIVERSITY BOSTON · PI SONENSHEIN, ABRAHAM LINCOLN · 1989 to 2015
$5.8M
The molecular control of bacterial programmed cell deathR01AI125589 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI BAYLES, KENNETH W. · 2016 to 2020
$1.9M
Integrating Global Responses to Nutrient Limitation in Gram-positive BacteriaR00GM099893 · NIGMS · GEORGETOWN UNIVERSITY · PI BRINSMADE, SHAUN R · 2013 to 2015
$725k
Integrating Global Responses to Nutrient Limitation in Gram-positive BacteriaK99GM099893 · NIGMS · TUFTS UNIVERSITY BOSTON · PI BRINSMADE, SHAUN R · 2012 to 2012
$90k
NIAID NIH HHS P01 AI083211NIAID NIH HHS R01 AI125589NIGMS NIH HHS K99 GM099893NIGMS NIH HHS R00 GM099893NIGMS NIH HHS R01 GM042219
6 · The paper itself

Abstract

In

Indexed as

Bacterial ProteinsBiofilmsGene Expression Regulation, BacterialGenotypeGuanineGuanosineRepressor ProteinsRNA, BacterialSequence Analysis, RNAStaphylococcus aureusTranscriptomeVirulence FactorsBacterial ProteinsCodY protein, Staphylococcus aureusGuanineGuanosineRepressor ProteinsRNA, BacterialVirulence FactorsAgrbiofilmsGTPproteasesSigB

Identifiers

PMID29712876
PMCPMC6018361
OpenAlexW2800629631

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.