Evidence map›Paper›PMID 29709896›Full record

ArticleMicrobes and environments2018

Ureolytic Prokaryotes in Soil: Community Abundance and Diversity.

Mamoru Oshiki, Mitsuru Araki, Yuga Hirakata, Masashi Hatamoto, Takashi Yamaguchi, Nobuo Araki

Abstract read
In one paragraph

Article in Microbes and environments, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  11. NMicrobes and environments · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mamoru OshikiDepartment of Civil Engineering, National Institute of Technology, Nagaoka College.
Mitsuru ArakiDepartment of Civil Engineering, National Institute of Technology, Nagaoka College.
Yuga HirakataDepartment of Science of Technology Innovation, Nagaoka University of Technology.
Masashi HatamotoDepartment of Environmental Systems Engineering, Nagaoka University of Technology.
Takashi YamaguchiDepartment of Science of Technology Innovation, Nagaoka University of Technology.
Nobuo ArakiDepartment of Civil Engineering, National Institute of Technology, Nagaoka College.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the turnover of urea is a crucial process in nitrogen transformation in soil, limited information is currently available on the abundance and diversity of ureolytic prokaryotes. The abundance and diversity of the soil 16S rRNA gene and ureC (encoding a urease catalytic subunit) were examined in seven soil types using quantitative PCR and amplicon sequencing with Illumina MiSeq. The amplicon sequencing of ureC revealed that the ureolytic community was composed of phylogenetically varied prokaryotes, and we detected 363 to 1,685 species-level ureC operational taxonomic units (OTUs) per soil sample, whereas 5,984 OTUs were site-specific OTUs found in only one of the seven soil types.

Indexed as

Soil MicrobiologyBacteriaBiodiversityDNA, BacterialNitrogenPhylogenyRNA, Ribosomal, 16SSoilUreaUreaseDNA, BacterialNitrogenRNA, Ribosomal, 16SSoilUreaUreasesoil microbiologyureaseurea turnoverureCureolytic prokaryote

Identifiers

PMID29709896
PMCPMC6031400

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.