ArticlePloS one2018
A comprehensive phylogeny of auxin homeostasis genes involved in adventitious root formation in carnation stem cuttings.
Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed, 11 citations in OpenAlex.
- Recent advances in auxin biosynthesis and homeostasis.3 Biotech · 2023Review
- Transcriptome Dynamics of Rooting Zone and Leaves during In Vitro Adventitious Root Formation inPlants (Basel, Switzerland) · 2022Article
- Altered Root Growth, Auxin Metabolism and Distribution inInternational journal of molecular sciences · 2021Article
- Expression Profile ofPlants (Basel, Switzerland) · 2020Article
- Auxin regulation andHorticulture research · 2020Article
- Molecular and physiological control of adventitious rooting in cuttings: phytohormone action meets resource allocation.Annals of botany · 2019Article
- A Genome-Wide Association Study Identifies New Loci Involved in Wound-Induced Lateral Root Formation inFrontiers in plant science · 2019Article
- Enhanced Conjugation of Auxin by GH3 Enzymes Leads to Poor Adventitious Rooting in Carnation Stem Cuttings.Frontiers in plant science · 2018Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Understanding the functional basis of auxin homeostasis requires knowledge about auxin biosynthesis, auxin transport and auxin catabolism genes, which is not always directly available despite the recent whole-genome sequencing of many plant species. Through sequence homology searches and phylogenetic analyses on a selection of 11 plant species with high-quality genome annotation, we identified the putative gene homologs involved in auxin biosynthesis, auxin catabolism and auxin transport pathways in carnation (Dianthus caryophyllus L.). To deepen our knowledge of the regulatory events underlying auxin-mediated adventitious root formation in carnation stem cuttings, we used RNA-sequencing data to confirm the expression profiles of some auxin homeostasis genes during the rooting of two carnation cultivars with different rooting behaviors. We also confirmed the presence of several auxin-related metabolites in the stem cutting tissues. Our findings offer a comprehensive overview of auxin homeostasis genes in carnation and provide a solid foundation for further experiments investigating the role of auxin homeostasis in the regulation of adventitious root formation in carnation.
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