Evidence map›Paper›PMID 29708975›Full record

ArticlePloS one2018

High prevalence of G3 rotavirus in hospitalized children in Rawalpindi, Pakistan during 2014.

Massab Umair, Bilal Haider Abbasi, Salmaan Sharif, Muhammad Masroor Alam, Muhammad Suleman Rana, Ghulam Mujtaba, Yasir Arshad, M Qaiser Fatmi, Sohail Zahoor Zaidi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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  8. Full genome characterization of human G3P[6] and G3P[9] rotavirus strains in Lebanon.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Massab UmairDepartment of Biotechnology, Quaid-i-Azam University, Islamabad, Pakistan.ORCID 0000-0003-4540-8467
Bilal Haider AbbasiDepartment of Biotechnology, Quaid-i-Azam University, Islamabad, Pakistan.
Salmaan SharifDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
Muhammad Masroor AlamDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
Muhammad Suleman RanaDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
Ghulam MujtabaDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
Yasir ArshadDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
M Qaiser FatmiDepartment of BioSciences, COMSATS Institute of Information Technology, Chak Shahzad, Islamabad, Pakistan.
Sohail Zahoor ZaidiDepartment of Virology, National Institute of Health, Chak Shahzad, Islamabad, Pakistan.
National Institute of Health · PKQuaid-i-Azam University · PKCOMSATS University Islamabad · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rotavirus A species (RVA) is the leading cause of severe diarrhea among children in both developed and developing countries. Among different RVA G types, humans are most commonly infected with G1, G2, G3, G4 and G9. During 2003-2004, G3 rotavirus termed as "new variant G3" emerged in Japan that later disseminated to multiple countries across the world. Although G3 rotaviruses are now commonly detected globally, they have been rarely reported from Pakistan. We investigated the genetic diversity of G3 strains responsible RVA gastroenteritis in children hospitalized in Rawalpindi, Pakistan during 2014. G3P[8] (18.3%; n = 24) was detected as the most common genotype causing majority of infections in children less than 06 months. Phylogenetic analysis of Pakistani G3 strains showed high amino acid similarity to "new variant G3" and G3 strains reported from China, Russia, USA, Japan, Belgium and Hungary during 2007-2012. Pakistani G3 strains belonged to lineage 3 within sub-lineage 3d, containing an extra N-linked glycosylation site compared to the G3 strain of RotaTeqTM. To our knowledge, this is the first report on the molecular epidemiology of G3 rotavirus strains from Pakistan and calls for immediate response measures to introduce RV vaccine in the routine immunization program of the country on priority.

Indexed as

Molecular EpidemiologyChild, HospitalizedFemaleHumansInfantInfant, NewbornMalePakistanPhylogenyPrevalenceRotavirusRotavirus Infections

Identifiers

PMID29708975
PMCPMC5927433
OpenAlexW2802783997

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.