Evidence map›Paper›PMID 29708331›Full record

ArticleACS infectious diseases2018

Effects of the 1- N-(4-Amino-2 S-hydroxybutyryl) and 6'- N-(2-Hydroxyethyl) Substituents on Ribosomal Selectivity, Cochleotoxicity, and Antibacterial Activity in the Sisomicin Class of Aminoglycoside Antibiotics.

Amr Sonousi, Vikram A Sarpe, Margarita Brilkova, Jochen Schacht, Andrea Vasella, Erik C Böttger, David Crich

Abstract read
In one paragraph

Article in ACS infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Strategic re-engineering of antibiotics.Nature reviews bioengineering · 2025
    Article
  4. Review
  5. Facile and selectiveGreen chemistry : an international journal and green chemistry resource : GC · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Dissociating antibacterial from ototoxic effects of gentamicin C-subtypes.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Apralogs: Apramycin 5-Journal of the American Chemical Society · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Amr SonousiDepartment of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States.
Vikram A SarpeDepartment of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States.
Margarita BrilkovaInstitut für Medizinische Mikrobiologie , Universität Zürich , Gloriastrasse 28/30 , 8006 Zürich , Switzerland.
Jochen SchachtKresge Hearing Research Institute, Department of Otolaryngology , University of Michigan , 1150 West Medical Center Drive , Ann Arbor , Michigan 48109 , United States.
Andrea VasellaLaboratorium für Organische Chemie , ETH Zürich , Vladimir-Prelog-Weg 1-5/10 , 8093 Zürich , Switzerland.
Erik C BöttgerInstitut für Medizinische Mikrobiologie , Universität Zürich , Gloriastrasse 28/30 , 8006 Zürich , Switzerland.
David CrichDepartment of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States.ORCID 0000-0003-2400-0083
Wayne State University · USUniversity of Zurich · CHETH Zurich · CHUniversity of Michigan · US

Funding

Shaping Next Generation Aminoglycoside Antibiotics for Treatment of Multidrug-Resistant DiseasesR01AI123352 · NIAID · WAYNE STATE UNIVERSITY · PI CRICH, DAVID · 2016 to 2019
$2.7M
NIAID NIH HHS R01 AI123352
6 · The paper itself

Abstract

Syntheses of the 6'- N-(2-hydroxyethyl) and 1- N-(4-amino-2 S-hydroxybutyryl) derivatives of the 4,6-aminoglycoside sisomicin and that of the doubly modified 1- N-(4-amino-2 S-hydroxybutyryl)-6'- N-(2-hydroxyethyl) derivative known as plazomicin are reported together with their antibacterial and antiribosomal activities and selectivities. The 6'- N-(2-hydroxyethyl) modification results in a moderate increase in prokaryotic/eukaryotic ribosomal selectivity, whereas the 1- N-(4-amino-2 S-hydroxybutyryl) modification has the opposite effect. When combined in plazomicin, the effects of the two groups on ribosomal selectivity cancel each other out, leading to the prediction that plazomicin will exhibit ototoxicity comparable to those of the parent and the current clinical aminoglycoside antibiotics gentamicin and tobramycin, as borne out by ex vivo studies with mouse cochlear explants. The 6'- N-(2-hydroxyethyl) modification restores antibacterial activity in the presence of the AAC(6') aminoglycoside-modifying enzymes, while the 1- N-(4-amino-2 S-hydroxybutyryl) modification overcomes resistance to the AAC(2') class but is still affected to some extent by the AAC(3) class. Neither modification is able to circumvent the ArmA ribosomal methyltransferase-induced aminoglycoside resistance. The use of phenyltriazenyl protection for the secondary amino group of sisomicin facilitates the synthesis of each derivative and their characterization through the provision of sharp NMR spectra for all intermediates.

Indexed as

AminoglycosidesAnti-Bacterial AgentsBase SequenceDose-Response Relationship, DrugDrug Evaluation, PreclinicalEscherichia coliHumansMicrobial Sensitivity TestsProtein BiosynthesisRibosomesSisomicinStructure-Activity RelationshipAminoglycosidesAnti-Bacterial AgentsSisomicinaminoglycoside-modifying enzymesaminoglycosidescell-free translation assaysribosomal methyltransferasesstructure−activity relationship

Identifiers

PMID29708331
PMCPMC6045441
OpenAlexW2799850391

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.