Evidence map›Paper›PMID 29706541›Full record

ArticleCell2018

The Egyptian Rousette Genome Reveals Unexpected Features of Bat Antiviral Immunity.

Stephanie S Pavlovich, Sean P Lovett, Galina Koroleva, Jonathan C Guito, Catherine E Arnold, Elyse R Nagle, Kirsten Kulcsar, Albert Lee, Françoise Thibaud-Nissen, Adam J Hume and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed, 1 pooled it
24.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 1 synthesis or guideline pooled it, 312 citations in OpenAlex.

  1. A metaanalysis of bat phylogenetics and positive selection based on genomes and transcriptomes from 18 species.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Pooled it
  2. Trial
  3. Article
  4. Article
  5. Egyptian rousette bat humoral immunity to H9 influenza hemagglutinin.bioRxiv : the preprint server for biology · 2026
    Article
  6. International journal of molecular sciences · 2026
    Article
  7. Article
  8. From bats to humans: uncoveringbioRxiv : the preprint server for biology · 2026
    Article
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  17. Review
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105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Stephanie S PavlovichDepartment of Microbiology, Boston University School of Medicine, Boston, MA 02118, USA.
Sean P LovettCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA.
Galina KorolevaCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA.
Jonathan C GuitoViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Catherine E ArnoldCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA.
Elyse R NagleCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA.
Kirsten KulcsarCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA.
Albert LeeDepartments of Systems Biology and Biomedical Informatics, Columbia University, New York, NY 10032, USA.
Françoise Thibaud-NissenNational Center for Biotechnology Information, National Library of Medicine, NIH, Bethesda, MD 20892, USA.
Adam J HumeDepartment of Microbiology, Boston University School of Medicine, Boston, MA 02118, USA; National Emerging Infectious Diseases Laboratory, Boston University, Boston, MA 02118, USA.
Elke MühlbergerDepartment of Microbiology, Boston University School of Medicine, Boston, MA 02118, USA; National Emerging Infectious Diseases Laboratory, Boston University, Boston, MA 02118, USA.
Luke S UebelhoerViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Jonathan S TownerViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Raul RabadanDepartments of Systems Biology and Biomedical Informatics, Columbia University, New York, NY 10032, USA.
Mariano Sanchez-LockhartCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA; Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Thomas B KeplerDepartment of Microbiology, Boston University School of Medicine, Boston, MA 02118, USA; Department of Mathematics and Statistics, Boston University, Boston, MA 02215, USA; National Emerging Infectious Diseases Laboratory, Boston University, Boston, MA 02118, USA. Electronic address: tbkepler@bu.edu.
Gustavo PalaciosCenter for Genome Sciences, United States Army Research Institute of Infectious Diseases (USAMRIID), Frederick, MD 21702, USA. Electronic address: gustavo.f.palacios.ctr@mail.mil.
United States Army Medical Research Institute of Infectious Diseases · USBoston University · USCenters for Disease Control and Prevention · USColumbia University · USNational Center for Biotechnology Information · US

Funding

National Biomedical Information ServicesZIHLM200888 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PALTOO, DINA · 2009 to 2025
$5200.7M
Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH · 1998 to 2026
$51.7M
RESEARCH TRAINING IN IMMUNOLOGYT32AI007309 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GUMMULURU, SURYARAM · 1988 to 2024
$7.4M
Quantitative Studies of influenza EvolutionR01GM109018 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHAPIRA, SAGI · 2014 to 2019
$2.6M
Uncovering Evolutionary History using the Topology of Genomic Data with Applications to HIVR01GM117591 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RABADAN, RAUL · 2015 to 2018
$1.3M
NIAID NIH HHS P30 AI042853NIAID NIH HHS T32 AI007309NIGMS NIH HHS R01 GM109018NIGMS NIH HHS R01 GM117591
6 · The paper itself

Abstract

Bats harbor many viruses asymptomatically, including several notorious for causing extreme virulence in humans. To identify differences between antiviral mechanisms in humans and bats, we sequenced, assembled, and analyzed the genome of Rousettus aegyptiacus, a natural reservoir of Marburg virus and the only known reservoir for any filovirus. We found an expanded and diversified KLRC/KLRD family of natural killer cell receptors, MHC class I genes, and type I interferons, which dramatically differ from their functional counterparts in other mammals. Such concerted evolution of key components of bat immunity is strongly suggestive of novel modes of antiviral defense. An evaluation of the theoretical function of these genes suggests that an inhibitory immune state may exist in bats. Based on our findings, we hypothesize that tolerance of viral infection, rather than enhanced potency of antiviral defenses, may be a key mechanism by which bats asymptomatically host viruses that are pathogenic in humans.

Indexed as

GenomeAmino Acid SequenceAnimalsCell LineChiropteraChromosome MappingDisease ReservoirsEgyptEvolution, MolecularGenetic VariationHistocompatibility Antigens Class IHumansImmunity, InnateInterferon Type IMarburgvirusMarburg Virus DiseaseHistocompatibility Antigens Class IInterferon Type INK Cell Lectin-Like Receptor Subfamily CNK Cell Lectin-Like Receptor Subfamily Dantiviral immunityChiropterafilovirusgenomeinnate immunitynatural killer cell receptorstype I interferon

Identifiers

PMID29706541
PMCPMC7112298
OpenAlexW2799839529

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.