Evidence map›Paper›PMID 29706535›Full record

ArticleMolecular cell2018

Redundant and Antagonistic Roles of XTP3B and OS9 in Decoding Glycan and Non-glycan Degrons in ER-Associated Degradation.

Annemieke T van der Goot, Margaret M P Pearce, Dara E Leto, Thomas A Shaler, Ron R Kopito

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. TAPT1 interacts with SUCO to maintain the homeostasis of newly synthesized proteins and brain development in mice.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. N-glycan-dependent protein maturation and quality control in the ER.Nature reviews. Molecular cell biology · 2025
    Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Turnover of EDEM1, an ERAD-enhancing factor, is mediated by multiple degradation routes.Genes to cells : devoted to molecular & cellular mechanisms · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. RPL26/uL24 UFMylation is essential for ribosome-associated quality control at the endoplasmic reticulum.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. ΔInternational journal of molecular sciences · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Annemieke T van der GootDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Margaret M P PearceDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Dara E LetoDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Thomas A ShalerSRI International, Menlo Park, CA 94025, USA.
Ron R KopitoDepartment of Biology, Stanford University, Stanford, CA 94305, USA. Electronic address: kopito@stanford.edu.
Stanford University · USMenlo School · US

Funding

The Ubiquitin Proteasome System in Quality ControlR01GM074874 · NIGMS · STANFORD UNIVERSITY · PI KOPITO, RON R · 2006 to 2022
$8.0M
Genetic interaction (GI) analysis of the mammalian ERAD systemF32GM113370 · NIGMS · STANFORD UNIVERSITY · PI LETO, DARA · 2015 to 2015
$58k
NIGMS NIH HHS F32 GM113370NIGMS NIH HHS R01 GM074874
6 · The paper itself

Abstract

Glycoproteins engaged in unproductive folding in the ER are marked for degradation by a signal generated by progressive demannosylation of substrate N-glycans that is decoded by ER lectins, but how the two lectins, OS9 and XTP3B, contribute to non-glycosylated protein triage is unknown. We generated cell lines with homozygous deletions of both lectins individually and in combination. We found that OS9 and XTP3B redundantly promote glycoprotein degradation and stabilize the SEL1L/HRD1 dislocon complex, that XTP3B profoundly inhibits the degradation of non-glycosylated proteins, and that OS9 antagonizes this inhibition. The relative expression of OS9 and XTP3B and the distribution of glycan and non-glycan degrons within the same protein contribute to the fidelity and processivity of glycoprotein triage and, therefore, determine the fates of newly synthesized proteins in the early secretory pathway.

Indexed as

Cell LineCell Line, TumorEndoplasmic ReticulumEndoplasmic Reticulum-Associated DegradationGlycoproteinsGlycosylationHEK293 CellsHumansK562 CellsLectinsNeoplasm ProteinsPolysaccharidesProtein FoldingProtein Translocation SystemsERLEC1 protein, humanGlycoproteinsLectinsNeoplasm ProteinsOS9 protein, humanPolysaccharidesProtein Translocation SystemsER-associated degradationER protein quality controlglycoproteinlectinOS9SEL1L-HRD1 complexXTP3B

Identifiers

PMID29706535
PMCPMC5935522
OpenAlexW2799522542

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.